Available online at www.sciencedirect.com
South African Journal of Botany 79 (2012) 173 – 240
www.elsevier.com/locate/sajb
Conference Abstracts
South African Association of Botanists (SAAB) – Annual Meeting 2012
Abstracts of papers and posters presented at the 38th Annual Congress of the South African
Association of Botanists held at the University of Pretoria, Pretoria, 15-18 January 2012
The presenter of multi-authored papers is underlined
★ Awards made to students
Plenary lectures
CO2 as a driver of global change in African ecosystems
W. Bond
Botany Department, University of Cape Town, South Africa
Savannas evolved under low atmospheric CO2 which favored C4 grasses over their C3 predecessors. Over the last century, CO2 has increased to levels exceeding those recorded in
paleo-atmospheres over at least the last million years. In the
coming century they are expected to increase to levels last
seen in the Eocene, more than 30 Ma ago. These anthropogenic
increases in CO2 are likely to have profound effects on African
ecosystems and especially C4 grassy ecosystems. Here I review
studies of the contributions of increasing CO2 to vegetation
change in African ecosystems. Simulation studies, glasshouse
experiments, and long term field experiments point to significant CO2 effects on woody plant expansion, especially in
higher rainfall savannas. The future of the C4 grassy biomes
in Africa looks very uncertain in a high CO2 world.
Desertification, carbon sequestration and job creation: The
science behind the Subtropical Thicket Restoration Project
R.M. Cowling a, A. Mills b, A. Sigwela a, S. Pierce a,
M. Van der Vyver a, C. Marais c
a
Restoration Research Group, Department of Botany, P.O. Box
77000, Nelson Mandela Metropolitan University, Port Elizabeth 6031, South Africa
b
Restoration Research Group, Department of Soil Science, Stellenbosch University, Private Bag X1, Matieland 7602, South Africa
c
Natural Resource Management, Department of Environment
Affairs, Parliament Towers, 103–107 Plein Street, Cape Town
8000, South Africa
Subtropical thicket ecosystems dominated by Portulacaria
afra (spekboom) store amounts of carbon comparable to forest
ecosystems that receive up to three times their annual rainfall.
This remarkable finding – an outcome of SANBI's Conservation Farming project – led to the initiation of research on the
potential to finance the restoration of degraded spekboom
thicket via the emerging carbon economy. The research,
which is funded by the Natural Resources Management Programme of the Department of Environment Affairs, was conceptualized as a monitoring and evaluation program, in order
to facilitate social learning and adaptive management for catalyzing large-scale, biome-wide restoration in the private sector.
This program was formalized as the Subtropical Thicket Restoration Project (STRP), a learning organization comprising managers and researchers. Here I describe a decade of biophysical
research that has culminated in the validation of the world's
first carbon sequestration project involving the restoration of a
desertified ecosystem. The STRP has successfully catalyzed
an initiative that is consistent with the South African government's commitment to create employment via a green
economy.
Regulation of carotenoid biosynthesis and its connection to
the biogenesis and function of plastids
J. Hirschberg
Department of Genetics, Alexander Silberman Institute of Life
Sciences, The Hebrew University of Jerusalem, Jerusalem
91904, Israel
Carotenoid pigments are essential components of the photosynthetic apparatus and thus are present in all green tissues of
plants. These molecules are synthesized within plastids from
the central isoprenoid pathway by enzymes that are nuclear
encoded. In addition to their primary functions in photosynthesis, carotenoids play essential roles in plant reproduction by
furnishing flowers and fruits with distinct pigmentation and
as precursors for volatiles and aroma compounds that
attract animals. Two phytohormones, abscisic acid (ABA) and
0254-6299/$ -see front matter © 2012 SAAB. Published by Elsevier B.V. All rights reserved.
doi:10.1016/j.sajb.2012.02.002
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strigolactones, are produced from carotenoids. We are studying
carotenoid biosynthesis and its regulation in flowers and fruits
of tomato (Solanum lycopersicum), which has become a
model system for chromoplast-containing plants. Over the
years we have developed various genetic tools to decipher carotenogenesis in plants by cloning and analyzing genes that encode enzymes of the pathway. To this end, we have isolated
novel mutations in tomato that alter pigmentation of flowers
and fruit. Through characterization of these mutations we
have identified new enzymes in the carotenoid biosynthesis
pathway. Recent results from characterization of mutations
demonstrated the importance of RedOx to the biosynthesis of
carotenoids and revealed a link between carotenoid biosynthesis and plastid biogenesis.
From botanical data to macroecological patterns in
invasion ecology
P. Pyšek
Institute of Botany, Academy of Sciences of the Czech Republic,
Průhonice & Department of Ecology, Faculty of Science,
Charles University in Prague, Czech Republic
Invasion ecology, as a field studying historical processes
and their current outcomes, crucially depends on centuries of
regional botanical tradition. The talk will explore how primary
botanical data can be used to infer about macroecological patterns and processes of plant invasions at various scales, hence
contributes to the invasion theory and our understanding of
habitat invasibility, species invasiveness and spread, as well
as factors determining these characteristics. Experiences with
building national and continental databases of alien species in
Europe, by using botanical literature and regional checklists
will be also discussed.
Metabolomics: a gateway to discoveries
R. Verpoorte, N. Yuliana, H.K. Kim, Y.H. Choi
Natural Products Laboratory, Institute of Biology Leiden,
Leiden University, P.O. Box 9502, 2300 RA Leiden, The
Netherlands
Metabolomics has developed in a major tool in all types of
research in the past decade. Functional genomics, plant resistance, quality control of food and botanicals, you name it.
The basis of metabolomics is making unbiased observations
with highly reproducible analytical tools, followed by a biostatistical analysis to find correlations between all the available
data. That is a systems biology approach, which may lead to
new discoveries. This can be illustrated by the identification
of the active compounds in medicinal plants. By measuring
the metabolome of different extracts, accessions or fractions
of a medicinal plant and combining these data with those of biological activity, signals related to the compounds related to
activity can be found. That may include prodrugs and synergy
in case of in-vivo experiments. To be able to measure all metabolites present in e.g. a plant, we developed comprehensive extraction as a way to rapidly identify the active compounds in
a plant. NMR-based metabolomics of the fractions obtained
with this method and combining these data with adenosine receptor binding activity data allowed the identification of flavonoids as the active compounds in Orthosiphon stamineus
leaves. A very different but quite exciting discovery we made
through the NMR-based metabolomics was the Natural Deep
Eutectic Solvents (NADES). The data we collected in NMRbased metabolomics made us to ask the question “why are a
few very simple molecules always present in considerable and
similar amounts in the spectra of any organism?” They must
have a basic function in living cells. They include sugars,
amino acids (e.g. proline, alanine, glutamine, asparagine), choline, and organic acids (e.g. malic, lactic, succinic acids).
Sugars serve for storage and energy, the other compounds are
in amounts that do not make sense to consider them only as
metabolic intermediates. We found that mixtures of organic
acids with bases form ionic liquids, whereas neutral solids
may form deep eutectic solvents, e.g. sugars with choline or
malic acid. NADES have a polarity like ethanol, and are excellent solvents for natural products, including DNA and proteins,
often with orders of magnitude higher solubility than in water.
In our hypothesis many cellular and physiological functions are
connected with the occurrence of NADES in nature.
Paper abstracts
Efficacy and toxicity of thirteen plants leaf acetone extracts
used in ethnoveterinary medicine in South Africa on the egg
and larva of Haemonchus contortus
M. Adamu a, V. Naidoo b, J.N. Eloff a
a
Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Science University of Pretoria,
South Africa
b
University of Pretoria Biomedical Research Centre, Pretoria,
South Africa
In this study thirteen plants leaf acetone extracts used traditionally in ethnoveterinary medicine in South Africa were evaluated using the egg hatch assay and the larval development test.
Cytotoxicity of these plants was also evaluated using the MTT
cellular assay. Extracts of three plant species i.e. Heteromorpha
trifoliata, Maesa lanceolata and Leucosidea sericea had EC50
values of 0.62 mg/ml, 0.72 mg/ml and 1.08 mg/ml respectively
for the egg hatch assay. Other plants with good anthelmintic activity include Clausena anisata; 1.08 mg/ml and Clerodendrum
glabrum; 1.48 mg/ml. In the larval development test H. trifoliata extract was the best with EC50 of 0.64 mg/ml followed
by L. sericea 1.27 mg/ml. The activities in the larval development test were generally lower in most plant species compared
to the egg hatch assay. Based on the cytotoxicity results
SAAB Conference Abstracts
C. anisata was the least toxic with an LC50 of 171.86 μg/ml,
while Cyathea dregei was the most toxic plant with an LC50
of 3.3 2 μg/ml. The selectivity index of the thirteen plants
shows C. anisata as the best with a value of 95.48 and 83.02
for both assays, this was followed by H. trifoliata and L. sericea with values of 68.58, 66.44 and 47.69, 40.55 for both assays and plant species respectively. The plant species with the
worst S.I was C. dregei with a value of 0.19 for both assays.
The result of this study confirms a scientific basis for the folkloric claim of the natives of South Africa in the use of these
plants for the treatment of helminthiasis in livestock. The possibility of finding a compound with good anthelmintic activity
from the most efficacious and less toxic plants will be evaluated. Further study will involve the fractionation of selected
plants and evaluating their anthelmintic activity.
In vitro screening for acetylcholinesterase inhibition and
antioxidant activity of medicinal plants from southern
Africa
E.A. Adewusi, V. Steenkamp
Department of Pharmacology, School of Medicine, Faculty of
Health Sciences, University of Pretoria, Private Bag X323,
Arcadia 0007, South Africa
Neurodegenerative disorders primarily affect the elderly
population. Alzheimer's disease, the most common neurodegenerative disorder, is associated with a deficiency in levels
of the neurotransmitter acetylcholine as well as increased generation of reactive oxygen species (ROS). The aim of the
study was to determine the acetylcholinesterase inhibitory
(AChEI) and antioxidant activity of the ethyl acetate and methanol extracts of 12 traditional medicinal plants used in the treatment of neurological disorders. AChEI activity was determined
spectrophotometrically using the Ellman's colorimetric method. Antioxidant activity was carried out by determining the
ability of the extracts to scavenge the 2,2-diphenyl-1-picryl
hydrazyl (DPPH) and 2,2′-azinobis-3-ethylbenzothiazoline-6sulfonic acid (ABTS) radicals. The levels of total phenols, flavonoids and flavonols were determined quantitatively using
spectrophotometric methods. AChEI was observed to be dosedependent. Lannea schweinfurthii (Engl.) Engl. and Scadoxus
puniceus (L.) Friis & I. Nordal. root extracts showed the lowest
IC50 value of 0.0003 mg/ml for the ethyl acetate extracts while
Zanthoxylum davyi (I. Verd.) P.G. Watermann had the lowest
IC50 value of 0.01 mg/ml for the methanol extracts in the
AChEI assay. The roots of Piper capense L.f., L. schweinfurthii, Ziziphus mucronata Willd., Z. davyi and Crinum bulbispermum (Burm.f.) Milne-Redh. & Schweick. showed
noteworthy radical scavenging activity and good AChEI activity. Five plants showed good antioxidant and AChEI activity.
These findings support the traditional use of the plants for treating neurological disorders especially where a cholinesterase
mechanism and ROS are involved.
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Molecular characterization of chili leaf curl virus and
satellite DNA associated with pepper in Oman
A.M. Al-Zaidi, J. Khan
Department of Crop Sciences, College of Agricultural & Marine Sciences, Sultan Qaboos University, P.O. Box-34, AlKhod, Sultanate of Oman
Pepper (Capsicum annuum) is cultivated in the coastal region of Al-Batinah, A'Sharqiya and Dhofar regions in the Sultanate of Oman during the winter season to meet the high
demand for fresh produce in the domestic market. To identify
the causal agent of a widespread disease associated with infestations of the whitefly Bemisia tabaci (Genn.), leaves were collected from sweet pepper plants showing symptoms
characteristic of the begomovirus disease in Al-Batinah and
Dhofar during 2010 and 2011. Total nucleic acids were isolated
from the pepper leaves and used as the template for Φ29 DNA
polymerase amplification of begomoviral circular DNA. Putative full unit length begomoviral DNA multimers were digested
with PstI and cloned into the plasmid vector pUC19. The complete nucleotide (nt) sequence was determined as 2758 base
pairs (bp), indicative of a monopartite begomoviral genome.
A comparison of the genome sequence for the ten field isolates
examined indicated that they shared 98–99% nt identity. The
virus from Oman was most closely related to ChLCV-Multan
at 96% nt identity, a monopartite begomoviral isolate described
previously from Pakistan. Based on the guidelines of the ICTV
the Oman isolate has been designated ChLCV-Om and is considered a strain of ChLCV-Multan. A satellite DNA (DNA β),
was amplified by polymerase chain reaction using degenerate
primers and cloned, and the DNA sequence was determined.
Analysis of the complete nt sequence of 1327 bp indicated
that the DNA β shared 96% similarity with its closest relatives,
which are TYLCV Al-Batinah DNA β molecules isolated from
tomato in Oman. This is the first report of ChLCV from Oman
and DNA β associated with the ChLCV-Om isolate. The
ChLCV-Om and associated TYLCV Al-Batinah DNA β thus
represent a begomovirus-complex at the Asian–Middle East
crossroads that uniquely share geographical and genetic hallmarks of both.
In vitro propagation and secondary metabolite production
in Aloe arborescens: The role of aromatic cytokinins
S.O. Amoo, A.O. Aremu, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
A. arborescens is well known for its medicinal and horticultural values. Plant biotechnology offers an efficient tool for the
production and modification of important plant secondary metabolites. A basic requirement for the transformation process
is the development of a simple yet efficient propagation
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SAAB Conference Abstracts
protocol. The choice of plant growth regulators (PGR), especially cytokinins, remains a critical factor in developing an efficient micropropagation system. In the present study, we
investigated the effects of five different concentrations each of
seven aromatic cytokinins (6-benzyladenine, meta-topolin and
their derivatives) on in vitro shoot regeneration and secondary
metabolite production in A. arborescens. All the treatments
produced adventitious shoots with high frequency ranging
from 86.7 to 100%. The highest number of adventitious shoots
produced per shoot-tip explant (7.3 ± 0.71) was observed in
Murashige and Skoog (MS) medium supplemented with 5 μM
benzyladenine riboside after six weeks of culture. Variable
amounts of iridoids, phenolics and flavonoids were present in
all the treatments. Unlike with most of the cytokinin treatments,
no proanthocyanidin was detected in regenerated plants cultured on PGR-free MS medium. In general, higher antioxidant
and radical scavenging activities were observed in regenerated
shoots produced in cytokinin-containing media when compared
to the PGR-free medium. Our findings indicate that exogenous
supply of different types and concentrations of aromatic cytokinins during micropropagation markedly influences in vitro production of bioactive secondary metabolites.
Phytoremediation of polychlorinated biphenyls (PCBs)
contaminated soil by Chromolaena odorata (L) King and
Robinson
R.O. Anyasi a, H.I. Atagana b
a
Department of Environmental Sciences University of South
Africa, Pretoria 0003, South Africa
b
Institute for Science and Technology Education, University of
South Africa, Pretoria 0003, South Africa
The ability of C. odorata propagated by stem cuttings and
grown for six weeks in the greenhouse to thrive in soil containing different concentrations of PCB congeners found in Aroclor
and transformer oil (TO), and to possibly remediate such soil
was studied under greenhouse conditions. C. odorata plants
were transplanted into soil containing 100, 200, and
500 μg g - 1 of Aroclor 1254 and 1260, and soil containing
100, 200, and 500 ml kg - 1 transformer oil (TO) in 1 L pots.
The experiments were watered daily to maintain 70% moisture
at field capacity. Parameters such as fully expanded leaves per
plant, shoot length, leaf color as well as the root length at harvest were measured. C. odorata growth was differently affected
by the different concentrations of transformer oil. The level of
inhibition to plant growth increased with concentration. However, the Aroclor amended soil did not affect the plant. At the
end of six weeks of growth, plants showed a diminished effect
in TO amended soil to the parameters tested. Plant size was increased by 1.4, 0.46 and - 1.0% in 100, 200 and 500 mg/kg respectively. In Aroclor amended samples, 45.9, 39.4 and 40.0%
were plant sizes at different concentrations. Such trend was observed in the leaf numbers and root length. Leaf color was pale
green in TO samples but, middle green in Aroclor amended
soils. The control sample has 43.3% increase in plant size
which was not significant among the values in Aroclor treated
soils, an indication that C. odorata could survive PCB contamination as to remediate it. The result of the on-going GCanalysis would be presented in the main paper and would be
used to establish the extent of remediation.
PRECIS, 35 years on
R.H. Archer
National Herbarium, South African National Biodiversity
Institute, Private Bag X101, Pretoria 0001, South Africa
Under the directorship of Bernard de Winter at the Botanical
Research Institute in the 1970s, the then innovative National
Herbarium, Pretoria (PRE) Computerised Information System
(PRECIS) was planned and become operational. Encoding of
470 000 mainly southern African and type specimens began in
June 1975 and was completed in December 1976. The system
was maintained on a Burroughs 7800 mainframe at the Department of Agriculture. This first version was soon completely
restructured and in April 1982 PRECIS II was implemented.
Today, PRECIS is integral to most activities at PRE and NBG
where it has expanded to more than 1 110 000 specimen records
and more than 60 000 taxon name records. A pc based version,
PRECIS.pc is used at NH but remains separate from PRECIS
itself. Additionally, PRECIS.pc has been implemented at
many smaller herbaria both within South Africa and 10 southern African countries as part of the 10 year SABONET project
(1996 to 2005). We present a historical and critical review of
intervening implementations of PRECIS on four different computer and software systems. At present we are preparing for the
fifth migration on to the internationally acclaimed BRAHMS
database (Botanical Research and Herbarium Management System) based at Oxford, England. It is time to ask the following
questions: Who were the main role-players behind PRECIS?
Did PRECIS achieve its initial expectations? What was the impact of PRECIS on herbarium management and research at
PRE and NBG and within SANBI, and on botany in South Africa in general?
Influence of six aromatic cytokinins on the growth, phenolic
and pigment contents of micropropagated banana (Musa
spp. AAA cultivar ‘Williams’)
A.O. Aremu, M.W. Bairu, J.F. Finnie, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
The effect of benzyladenine (BA) and five topolins (metaTopolin = mT; meta-Topolin riboside = mTR; meta-Methoxy
topolin = MemT; meta-Methoxy topolin riboside = MemTR and
meta-Topolin 9-tetrahydropyran-2-ylpurine = mTTHP) on the
SAAB Conference Abstracts
growth, phenolic and photosynthetic pigment contents of ‘Williams’ bananas were evaluated. Explants were cultured for
42 days on modified Murashige and Skoog media containing
10, 20 and 30 μM of the above aromatic cytokinins (CK).
Using spectrophotometric methods, phenolic and pigment contents were quantified from the 50% methanol and acetone extracts, respectively. Analysis of growth parameters indicate
that the use of 30 μM mT resulted in the highest shoot multiplication rate (7 shoots/explant). Shoot length and fresh weight
per plantlet were significantly lower in all the treatments compared to the control. However, at 30 μM CK treatment shoot
dry weights were significantly higher than the control, with
the highest being treatment with MemT. The lowest abnormality frequency was observed in 10 μM mTR regenerants. Treatments with 10 μM mT (25.3 ± 4.98) and mTTHP (27.0 ± 3.30)
had the highest number of roots/explant. These treatments stimulated significantly higher total phenolic content in aerial parts
of the plantlets. Conversely, 30 μM mTTHP favored accumulation of the same secondary metabolites in the underground
parts. Accumulation of these metabolites would probably enhance plant acclimatization. In terms of photosynthetic pigments (chlorophyll a, b and carotenoids), CK treatments
brought no improvement in the regenerated plantlets. Studies
on endogenous CK profiles and effect of the aromatic CKs on
genetic stability are currently underway.
Pollination of Aloe peglerae – An endangered endemic of
the Magaliesberg Mountains, South Africa
G. Arena, C. Symes, E.T.F. Witkowski
School of Animal, Plant and Environmental Sciences, University of Witwatersrand, Private Bag 3, Johannesburg 2050, South
Africa
A. peglerae is a winter flowering succulent endemic to the
Magaliesberg Mountains. It is listed as Endangered and is vulnerable to illegal collecting from the wild. The attractive inflorescence and the height of the raceme make it conspicuous to
pollinators. Flowers produce nectar of low concentration
(9.9%) and relatively high volumes (17.5 μl), hence we hypothesized that effective pollination is facilitated through aviannectar feeding only. Pollinator exclusion experiments were
used to determine contributions to fruit and seed set by different
pollinator guilds. Three treatments were applied to sixty ‘focal’
aloes; 1) control – open to all floral visitors, 2) bird exclusion –
mesh cage allowing only insect visitors, and 3) total exclusion –
fine mesh netting excluding all floral visitors. Average% fruit
set with bird and total exclusions was low (12.1 and 5.3%, respectively), while control plants had by far the highest fruit
set (40.4%, P N 0.05), suggesting that birds are the major pollinators for A. peglerae. Similarly, seed set per fruit under bird
and total exclusion were also much lower (16.9 and 15.7%, respectively) than in control plants (38.3%; P b 0.0001). Finally,
total seed production per plant was much lower in bird and
total exclusions (497 and 322, respectively), compared with
177
the control (3868; P b 0.0001). Nectar production increased
from morning to midday when feeding rates of birds were
higher, resulting in nectar standing crop volume decreasing
during the afternoon (28.8 μl). There was a slight increase in
standing crop from the morning (29 μl) to midday (38.1 μl).
However, nectar concentration remained constant through the
day (9.7–10.2% w/w). Understanding the pollination biology
of A. peglerae, together with information on its population demography, will contribute significantly to conserving this
species.
The germination and propagation potential of Securidaca
longepedunculata Fresen
O. Baloyi, R.B. Bhat, M.P. Tshisikhawe
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
S. longepedunculata Fresen. is commonly known as the violet tree of the polygalaceae family. S. longepedunculata as a
medicinal plant, is used in both Western and Southern Africa
to treat a wide range of ailments. Because of its many uses,
the plant is now faced with unsustainable harvesting pressure
which in the long run may lead to the plant being extinct.
Therefore, there is a need to implement cultivation tools to
save this valuable, medicinal plant. In this study, we studied
the germination potential of S. longepedunculata under three
germination factors; temperature, light and soil depth. Seeds
were subjected to three pre-treatment; mechanical scarification,
soaking in distilled water overnight and soaking in 3.5% m/v
domesticated bleach for 60 min. Optimal temperatures for
seed germination were 20 °C and 30 °C. With regard to soil
depth, high germination percentage was obtained at soil depth
of 4 cm, with seedling emergence of 30%. Both depths 2 cm
and 8 cm had seedling emergence of 10% respectively and
only 3% at 6 cm. No seedlings emerged at 10 cm level. Based
on the findings, it is concluded that soil depth has an effect
on seedling emergence and S. logepedunculata responds well
to soil depth of 4 cm.
The effect of temperature and relative humidity on Acacia
mearnsii pollen viability
S.L. Beck-Pay, K. Koen
Institute for Commercial Forestry Research, P.O. Box 100281,
Scottsville 3209, Pietermaritzburg, South Africa
A. mearnsii (black wattle) is a commercially important forestry species in South Africa, grown for its timber as well as
its bark. It is, however, also considered to be an alien invader
of indigenous vegetation and for this reason the production of
a sterile variety would be highly desirable for commercial forestry in South Africa. Previous research on crosses between
diploid and tetraploid parent plants to produce triploid progeny
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has resulted in poor seed set. One possible barrier preventing
seed set could be the viability of the pollen used in the cross
pollination operations. Thus a study was conducted to test the
pollen viability. In vitro agar media germination tests
(ACIAR and Brewbaker and Kwack media) together with
vital stain tests (Sigma® DAB peroxidase and pphenylendiamine) were used to test pollen germination and viability of A. mearnsii pollen. These were then compared to in
vivo pollen germination on the stigma. Results showed that
the vital stain tests gave significantly (P b 0.05) higher pollen
viability (59.53 and 60.67%) than the agar germination tests
(11.92 and 24.50%) and were more in agreement with the results from the pollen germination rate on the stigma
(94.59%). In 2011 pollen was subjected to various temperature
and relative humidity combinations, to simulate conditions
recorded within the isolation bags being used in the 2010 flowering season. The results from this study together with a comparison of pollen viability results across three seasons (2009,
2010 and 2010) will be discussed.
Anticancer activity of certain herbs and spices on the
cervical epithelial carcinoma (HeLa) cell line
What drives invasion success on Robben Island, South
Africa?
B.S. Bezeng a,b, O. Maurin a,b, K. Yessoufou a,b,
M. Van der Bank a,b
a
African Centre for DNA Barcoding, University of Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg,
South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
Robben Island was declared a world heritage site in 1999. It
lays 11 km from the port of Cape Town with a surface area of
about 500 ha. Natural ecosystems on the Island have been severely degraded and altered by the introduction of various
fauna and alien vegetation. The woody shrub component of
the original West Coast Strandveld vegetation has been eradicated and the diversity of the herbaceous component has been
reduced, with major invasion by alien plant species occurring
since 1933 with apparent little invasion prior to this period.
Currently a new management plan for the natural environment
of Robben Island has been developed. The main goal of this
study is to determine what drives invasion success on Robben
Island. Our main results will be discussed.
D. Berrington, N. Lall
Department of Plant Sciences, University of Pretoria, Pretoria
0002, South Africa
Acetone extracts, of nine herbs and one spice, were prepared
and tested for their cytotoxic ability, in vitro, against a noncancerous African green monkey kidney (Vero) cell line and an adenocarcinoma cervical cancer (HeLa) cell line. The plants
studied were: Origanum vulgare (Oregano), Rosmarinus officinalis (upright rosemary and groundcover rosemary), Lavendula
spica (Lavender), Laurus nobilis (Bay leaf), Thymus vulgaris
(Thyme), Lavendula × Intermedia (Margaret Roberts Lavender), Petroselinum crispum (Curly leaved parsley), Foeniculum
vulgare (Fennel) and C. annuum (Paprika). Of these plants only
L. nobilis and O. vulgare exhibited pronounced cytotoxic effects on the HeLa cell line. Dose-dependent studies revealed
50% inhibitory concentrations (IC50) values of 34.46 μg/ml
and 126.3 μg/ml on the HeLa cell line and IC50 of 124.1 μg/
ml and 163.8 μg/ml on the Vero cell line for L. nobilis and O.
vulgare respectively. The cytotoxic ability was measured
using XTT (sodium 3′-[1-(phenyl amino-carbonyl)-3,4-tetrazolium]-bis-[4-methoxy-6-nitro] benzene sulfonic acid hydrate)
colorimetric assay. Antioxidant activity was determined using
DPPH (1,1-Diphenyl-2-picryl hydrazyl). Both L. nobilis and
O. vulgare showed good free radical scavenging capability
with IC50 values of 30.8 5 μg/ml and 26.43 μg/ml respectively.
Light microscopy (eosin and hematoxylin staining) and confocal microscopy (Hoechst 33342, acridine orange and propidium
iodide staining) were used to evaluate the mechanism of action
of the acetone leaf extracts of L. nobilis and O. vulgare.
Progress towards DNA barcoding of invasive species in
South Africa
J.S. Boatwright a,b, M.T. Sethusa c, O. Maurin c, P. Ivey d,
M. Hamer e, M. Van der Bank c
a
Compton Herbarium, South African National Biodiversity Institute, Private Bag X7, Claremont 7735, Cape Town, South
Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
African Centre for DNA Barcoding, University of Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg,
South Africa
d
Early Detection and Rapid Response Unit, South African National Biodiversity Institute, Private Bag X7, Claremont 7735,
Cape Town, South Africa
e
Biosystematics Division, South African National Biodiversity
Institute, Private Bag X101, Pretoria 0001, South Africa
South Africa's rich biodiversity, with ca. 20 456 species, is
under constant threat mainly through agriculture, urbanization,
habitat loss and encroachment of alien invasive species. More
than ca. 660 naturalized plant species are currently known to
be contributing to the widespread transformation of once pristine habitats in the country. Furthermore, an array of invasive
animal species has also established feral populations. The
early detection of invasive species and rapid response for eradication rely on accurate species level identification. This is
SAAB Conference Abstracts
often difficult as, outside their native range, there is a lack of
herbarium and museum records, regional specific literature
and expertise to aid in the identification of these species. In
light of the challenges opposing accurate identification, alternative solutions need to be explored. DNA barcoding is one such
tool that may aid in the identification of unknown material (especially when only incomplete material is available). This requires the use of short, highly informative DNA regions to
discriminate between species. This lecture reports on a collaborative project between the Early Detection and Rapid Response
Programme of the Working for Water Programme and South
African National Biodiversity Institute (SANBI) and the African Centre for DNA Barcoding (ACDB) at the University of
Johannesburg, funded by the Natural Resource Management
Programme (Department of Environmental Affairs) which
was started in August 2011. This project will form part of the
International Barcode of Life Project (iBOL) and aims to collect invasive plant and animal samples in South Africa as well
as South African species known to be invasive elsewhere in
the world over an eight month period for DNA barcoding.
The team consists of, apart from the co-ordinators, seventeen
collaborators from 10 universities and research institutions in
the country. Twenty-four recent graduates have been appointed
at many of these institutions to undertake the collection and
processing of samples for DNA barcoding.
The in vitro inhibitory effect of Ptaeroxylon obliquum
(Thunb.) Radlk. on adhesion of Candida albicans to
human buccal epithelial cells (HBEC)
F.S. Botha, C. Van Wyk, V. Bagla, J.N. Eloff
Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Science, University of Pretoria,
Private Bag X04, Onderstepoort 0110, South Africa
Candidal adherence to human buccal epithelial cells (HBEC)
is the critical initial step in the pathogenesis of oral candidiasis,
which may eventually lead to a systemic infection. Since the
ability of C. albicans to form a germ tube and hyphae is an indication of replication and growth, its adherence to HBEC can be
seen as a step in the colonalization of buccal epithelial cells in
oral candidiasis, because the organisms cannot be removed by
natural cleaning mechanisms' in the oral cavity. The ability of
C. albicans standard strain (ATCC 10231) and two clinical isolates to adhere to healthy buccal epithelial cells (HBEC) in the
presence of P. obliquum (Thunb.) Radlk., a medicinal plant
used for several pharmaceutical purposes, were examined.
Leaves of P. obliquum were harvested, dried and ground to
powder. Extract of powdered leaves of P. obliquum were
extracted with acetone at room temperature and 250 mg/ml
P. obliquum acetone leaf extract was used as the starting concentration for the subsequent study. P. obliquum acetone leaf
extract possessed antifungal activity toward C. albicans standard strain (ATCC 10231) and two clinical isolates. Adhesion
of P. obliquum acetone leaf extract to HBEC was concentration
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dependent and exhibited marked inhibitory effect on the ability
of C. albicans strains to adhere to healthy buccal epithelial cells
which were evident at higher concentrations. Light microscopy
images showed that P. obliquum acetone leaf extract had an effect on the adhesion of C. albicans to HBEC. Where no inhibitory effect was observed, hyphae formation or germ tube
formation (budding) was evident. In some cases it was observed
that the C. albicans cells were destroying the ultra structure of
the epithelia cells. This study shows the presence of substances
in P. obliquum acetone leaf extracts with potential inhibitory effect on the adhesion of C. albicans to HBEC.
Volatile emissions of Puccinia triticina infected wheat and
its effect on uninfected wheat seedlings
H.D. Castelyn, B. Visser, Z.A. Pretorius
Department Plant Sciences, University of the Free State, P.O.
Box 339, Bloemfontein 9300, South Africa
Plants emit a vast array of different volatile organic compounds to which surrounding plants can respond. Recent research
indicated a putative volatile signaling event between leaf rust
(P. triticina) infected and uninfected wheat (T. aestivum). In the
current project uninfected wheat was exposed to volatiles emitted
by leaf rust infected wheat in a continual air flow system. Volatile
exposure was done for different combinations of susceptible
(Thatcher) and resistant (Thatcher + Lr9) wheat lines. The induction of a plant defense response in the uninfected wheat was confirmed on phenotypical, biochemical (β-1.3-glucanase activity)
and gene expression (PR2 gene) levels. This defense activation
in the exposed uninfected plants could be attributed to the released volatiles. Volatile profiles emitted by the infected wheat
were determined and the results will be discussed.
Identification, pathogenicity and population diversity of a
new stem canker pathogen in the Cryphonectriaceae on
Rapanea melanophloeos in South Africa
S. Chen a, M.J. Wingfield a, F. Roets a, J. Roux a
a
DST/NRF Centre of Excellence in Tree Health Biotechnology
(CTHB), Forestry and Agricultural Biotechnology Institute
(FABI), Department of Microbiology and Plant Pathology,
Private Bag X20, University of Pretoria, Hatfield, Pretoria
0028, South Africa
b
Department of Conservation Ecology and Entomology,
Stellenbosch University, Stellenbosch 7600, South Africa
R. melanophloeos (Myrsinaceae), commonly known as
Cape Beech, is native to Africa and forms an important component of Afro-montane forests. During disease surveys in the
Western Cape Province of South Africa, a serious stem canker
disease on R. melanophloeos trees was observed in the Harold
Porter National Botanic Garden. Infection on the trees often results in the death of branches and entire stems above the
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cankers. Fruiting structures typical of fungi in the Cryphonectriaceae were observed on the surfaces of cankers. The aim of
this study was to identify the causal agent of this disease and
obtain information on its possible origin. Multiple gene analyses of the partial LSU and ITS nuclear ribosomal DNA, and
two regions of the β-tubulin gene, showed that the fungus represents a previously undescribed genus and species in the Cryphonectriaceae. Phylogenetic analyses, as well as morphological
comparisons suggest that it is most closely related to the genus
Microthia. Stem inoculations indicated that the fungus is an aggressive pathogen of R. melanophloeos trees, with the ability to
kill inoculated stems within six weeks. Based on vegetative
compatibility groups (VCGs), the diversity of the pathogen in
the Harold Porter National Botanic Garden is low, suggesting
that it may have been introduced from outside the area where
it is currently found.
Medicinal orchid research – A South African perspective
M. Chinsamy, J.F. Finnie, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
Orchidaceae, the largest Angiosperm family, has a worldwide distribution of an estimated 35 000 species and 796 genera. Approximately 75% of the ± 1500 species occurring in
southern Africa are endemic to the region and occupy very restricted distribution ranges. The relatively small number of species used in African traditional practices (± 49 species) may
represent a more refined list of the most used species and/or
genera. Generally, orchids are fiercely protected on the basis
that they are rare and under threat from excessive collection.
However, earlier threats such as collection for cultivation and
horticulture and more recent threats such as loss of habitat
and urbanization pose more of a risk to orchid populations.
The conservation status of most medicinally used orchid species are Least Concern and could either reflect a negligible impact by collection for medicinal uses or it could indicate a lack
of knowledge, or both, on such orchids. One of the gaps in our
knowledge of South African orchids is the ethnobotanical,
pharmacological and phytochemical usages of medicinal orchids. Understanding the usefulness of, and possible threats
to, traditionally used orchid species would enable increased
protection of these orchids and their habitats. Factors influencing use, distribution and the conservation status of medicinally
used orchids will be addressed, together with a summary of the
pharmacological and phytochemical assessments of some
South African exploited orchid species.
Floristic comparison of the northern and southern
KwaZulu-Natal Drakensberg
P. Cingo, G.V. Cron
School of Animal, Plant and Environmental Sciences, University of Witwatersrand, Private Bag 3, WITS 2050, South Africa
The KwaZulu-Natal Drakensberg forms part of the Drakensberg Alpine Centre above 1800 m, which is renowned for its
species richness and high levels of endemism. Within the
KZN Drakensberg two regions have been recognized: the
south-east facing southern region and northern region with a
north-east aspect and their floras are expected to be different.
The aim of the study was to compare the northern KZN Drakensberg to the southern KZN Drakensberg floristically and
to add to the knowledge of the flora of the northern KZN Drakensberg by collecting in a relatively under collected region.
The PRECIS data set was used (supplemented with Ezemvelo
KwaZulu-Natal Wildlife data) and a floristic comparison was
done on family, genera and species composition. The composition of the top ten families was found to be very similar, but
they differ in ranking except for the two largest families Asteraceae and Poaceae and three largest genera: Helichrysum, Senecio and Erica. The northern KZN Drakensberg appears to be
more diverse with 1692 species compared to the southern Drakensberg which supports 1284 species above 1800 m. The
southern KZN Drakensberg has, however been more thoroughly studied and has a greater number of collections compared to
the northern KZN Drakensberg. Results from the chi-squared
test show no significant difference between northern and southern KZN Drakensberg flora. 557 specimens, including 321 species in 170 genera and 59 families were collected from the
Injisuthi region (northern KZN Drakensberg); with majority
of collections in the altitudinal zone(s) 1800–1900 m and
1900–2025 m. Two new species were added to the known
flora: Aspilia natalensis (Asteraceae) and Bothriochloa
insculpta (Poaceae). Most plants were noted to flower in latespring to early/mid-summer.
Ganoderma root rot: The scourge of Jacaranda mimosifolia
in the “City of Jacarandas”
M.P.A. Coetzee a, V.G. Muthelo b, M.J. Wingfield b,
B.D. Wingfield b
a
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria,
South Africa
b
Department of Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria,
South Africa
Pretoria is adorned by thousands of J. mimosifolia trees. The
city is rightly referred to as the “City of Jacarandas”, and covered during spring in a cloud of purple. Large numbers of
these trees are dying in the suburb of Brooklyn due to a root
and butt rot disease apparently caused by a species of Ganoderma. Fruiting bodies of Ganoderma resembling those in the
“Ganoderma lucidum” complex are commonly found at the
bases of dying trees every year after the onset of rain in spring
SAAB Conference Abstracts
and early summer. The “G. lucidum” complex includes several
paraphyletic groups that are considered to represent different
species with similar morphology; the true identity of the fungus
causing the disease on Jacaranda trees is therefore unknown.
The aim of this study was to characterize the species of Ganoderma that is found on Jacaranda trees dying from this root rot
disease based on morphological characteristics and DNA sequence comparisons. Basidiocarps were collected from infected
trees and their morphology was examined. Fungal isolations
were made and cultural characteristics including growth habit,
color and presence of chlamydospores were determined. DNA
was extracted from the isolates and sequences obtained for
the ITS regions (ITS-1, 5.8S gene and ITS-2), the IGS-1 region
as well as the mitochondrial small subunit (mtSSU) gene. Morphological observations revealed that all of the isolates represented a species that was similar to those in the G. lucidum
complex. DNA-based phylogeny confirmed that these isolates
are closely related to G. lucidum. The gene phylogenies were,
however, not congruent. Although a specific identification
could not be made, the results of this study show that G. lucidum is a phylogenetically variable species complex and that
the Ganoderma sp. commonly found associated with root rot
disease of Jacaranda trees in Brooklyn resides in G. lucidum
sensu lato.
Attenuation of in vitro oxidative stress by polyphenolic-rich
fractions of Burkea africana and Syzygium cordatum
W. Cordier a , M. Gulumian b, A.D. Cromarty a, V. Steenkamp a
a
Department of Pharmacology, Faculty of Health Sciences,
School of Medicine, University of Pretoria, P.O. Box X323,
Arcadia 0007, Pretoria, South Africa
b
Department of Toxicology, National Institute for Occupational Health, P.O. Box 4788, Johannesburg 2000, South Africa
Excessive production of ROS and free radicals in cells results in oxidative stress, a state which is involved in the etiology of diseases such as diabetes, neurodegeneration and
cardiomyopathy. Antioxidant supplementation has been suggested as a prophylactic measure to control disease progression.
Due to potential toxicity with synthetic antioxidant usage natural alternatives are becoming ever-popular. B. africana Hook.F
(Fabaceae) and S. cordatum Hochst. ex C. Krauss (Myrtaceae)
are both used ethnomedically for oxidative stress-related diseases. Plant extracts were fractionated through liquid–liquid
extraction and assessed for polyphenolic content, antioxidant
activity, inherent cytotoxicity and potential to reverse oxidative
stress-induced parameters. Polyphenolic content was higher in
B. africana (90.88 and 105.71 mg/g GAE and RE, respectively)
than S. cordatum (43.36 and 49.80 mg/g). Cytotoxicity assessed through neutral red uptake was apparent for B. africana
and S. cordatum in 3T3-L1 pre-adipocyte (IC50 = 24.3 μg/ml
and 25.0 μg/ml, respectively) and C2C12 myoblast (13.9 μg/
ml and 20.5 μg/ml) cell lines, but not in normal human dermal
fibroblasts and 48 h PMA-stimulated U937 monocytic cells
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(N100 μg/ml). Antioxidant activity was found to be greater
for S. cordatum when using the TEAC and DPPH assays
(2.03 and 2.18 TE, respectively) than for B. africana (2.46
and 2.98). Both plants decreased the oxidative stressparameters induced by AAPH in terms of cytotoxicity, ROS
formation, apoptosis and lipid peroxidation. S. cordatum elicited the most potent decrease in ROS formation (N 80% at
2.5 μg/ml). B. africana had the greatest anti-apoptotic effect,
reducing caspase-3 activity by 40% at 20 μg/ml. B. africana
and S. cordatum had similar activity in attenuating lipid peroxidation with 206.7% and 195.9% reduction at 20 μg/ml, respectively. The usage of these polyphenolic-rich fractions may be
beneficial, in the treatment or prevention of oxidative stressrelated disorders.
Better late than never? The high cost of self-incompatibility
in Aloe maculata (Asphodelaceae)
R.J. Cozien, S.D. Johnson
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
Close to half of all flowering plant species show reduced reproductive success following self-pollination. This was long assumed to be achieved primarily through self-incompatibility
mechanisms acting in the stigma or style to prevent germination
of self pollen or successful growth of pollen tubes to the ovary.
A few studies have shown, however, that even after self-pollen
tubes penetrate the ovules, fecundity may be similarly reduced.
Because of the high reproductive cost of disabled or aborted
ovules, such late-acting self-incompatibility mechanisms should
occur less frequently. To establish the relative importance of the
different mechanisms, we investigated the breeding system of
A. maculata, a South African succulent from a family in which
self compatibility known but largely uncharacterized. Hand pollinations with self and cross pollen revealed very high levels of self
incompatibility. Pollen chase experiments following cross pollination 24 h after self pollination indicated that self pollen usurps
ovules. This was supported by a significant reduction in fecundity
after hand pollination with mixtures of self and cross pollen relative to pollination with only cross-pollen. Hand pollinations with
mixtures of cross and self, and cross and dead pollen showed that
reduced fecundity does not result from stigma clogging by self
pollen. Examination of pollen germination and tube growth
using fluorescence and light microscopy confirmed that most
ovules are fertilized within 24 h of pollination with either self or
cross pollen. Pollinator exclusion completely prevented fruit set.
Open-pollinated flowers had similar fruit and seed set to intact
flowers supplemented with cross pollen, but both were less successful than flowers which received only cross-pollen, indicating
that pollen quality limits reproductive success in natural populations. Further investigations are required to establish whether reduced fecundity following self pollination results from lateacting self-incompatibility or early inbreeding depression.
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Understanding the transcriptional regulation of the
Eucalyptus cellulose synthase1 gene
N.M. Creux a,b, M. Ranik a,b, M.H. De Castro a,b ,
A. Spokevicius c, G. Bossinger c, C. Maritz-Olivier a,
A.A. Myburg a,b
a
Department of Genetics, University of Pretoria, Pretoria
0002, South Africa
b
Forestry and Agricultural Biotechnology Institute (FABI),
University of Pretoria, Pretoria 0002, South Africa
c
Department of Forest and Ecosystem Science, Melbourne
School of Land and Environment, University of Melbourne,
Water Street, Creswick, Victoria 3363, Australia
Cellulose is a highly abundant biopolymer found in plant cell
walls and has received considerable attention from various industries due to its unique molecular characteristics. Cellulose is deposited into plant cell walls by a large cellulose synthase
(CesA) protein complex embedded in the cell membrane. The
CesA proteins within this complex differ depending on whether
primary or secondary cell walls are being deposited. While
many studies have focused on the characterization of this enzyme
and its biosynthetic pathway, there are few studies on the spatiotemporal regulation of the corresponding genes. We aimed to
identify the promoter regions that interact with the transcription
factors and modulate the expression of the Eucalyptus grandis
CesA1 gene. We performed an in silico analysis on the promoters
of six Eucalyptus CesA gene family members and identified a
number of highly conserved cis-elements. The positions of
these conserved elements allowed for targeted truncation of the
EgCesA1 promoter. β-glucuronidase reporter-gene analysis in
Arabidopsis and Eucalyptus enabled us to assign putative functions to some of the conserved regions. We also identified regions
in the promoter that may contain novel elements necessary for
EgCesA1 expression as they influenced β-glucuronidase expression but contained no known cis-elements. Several previously
identified transcription factors are known to regulate CesA
genes and we have cloned these to test which regions of the promoter these proteins bind. We are also screening the functional
promoter regions against a cDNA expression library to identify
novel proteins which may bind to the CesA1 promoter. Pairing regions of promoter sequence with transcription factors that binds
them will aid in completing the regulatory model for this gene's
promoter. This information will be useful on a fundamental
level to understand the transcriptional control of cellulose biosynthesis in trees, as well as being applicable to future biotechnology
approaches to enhance cellulose production.
On the wings of butterflies: unique floral morphology and
flower orientation promotes cross-pollination in Gloriosa
superba
R.J. Daniels, C.I. Peter
Department of Botany, Rhodes University, Grahamstown 6140,
South Africa
G. superba L. (Colchicaceae) has conspicuous, brightly colored crimson and yellow flowers with reflexed and inverted
tepals. Butterflies and sunbirds have been reported to visit the
flowers but little work has been done to investigate the pollination biology of this species. In this paper, the identity of pollinators was investigated. In addition, measurements of stigma
and pedicel orientations, nectar concentration and volume measurements and pollinator observations were used to test a number of hypotheses regarding the direction from which
pollinators approach the flowers and the orientation of the stigma. It was hypothesized that (a) arriving pollinators would approach from clearings, (b) flowers would project toward
clearings by pedicel orientation (c) stigmas would be orientated
toward clearings to increase the likelihood of cross-pollination
and (d) there is stigma–anther spatial separation to limit selfing.
Results indicated that G. superba is specialized for butterfly
pollination. Eronia cleodora is by far the most common visitor,
although sunbirds occasionally visit in gardens but they are unlikely to be important pollinators. G. superba is one of the few
known angiosperms that loads its pollen onto the wings of its
pollinator. Anthers are separated from stigmas horizontally
but overlap vertically. There was support for pedicel orientation
away from vegetation and stigma orientation toward clearings
to intercept incoming pollinators. Pollinator observations of
tepal position corresponding to the sequence in which tepals
were visited also support this hypothesis. Few butterflies visited
N1 tepal/flower or N 1 flower/patch indicating potentially high
outcrossing rates.
The additive and synergistic antimicrobial effects of
frankincense and myrrh – Essential oils from
the predynastic period
S. De Rapper a, S.F. Van Vuuren a, G.P.P. Kamatou b,
A.M. Viljoen b
a
Department of Pharmacy and Pharmacology, Faculty of
Health Sciences, University of the Witwatersrand, 7 York
Road, Parktown 2193, South Africa
b
Department of Pharmaceutical Sciences, Faculty of Science,
Tshwane University of Technology, Pretoria 0001, South
Africa
The historical use of frankincense and myrrh essential oils
date back to biblical times, however, very little is known of
their antimicrobial effects when used in combination. This
study investigated the in vitro antimicrobial activity between
three essential oil samples of frankincense (Boswellia rivae,
Boswellia neglecta, Boswellia papyrifera) and two essential
oil samples of myrrh (Commiphora guidotti and Commiphora
myrrha) independently and in combination against various
micro-organisms. When examined independently, it was noted
that generally Cryptococcus neoformans and Pseudomonas
aeruginosa often appeared to be the most susceptible microorganisms against oils both of Boswellia and Commiphora
spp. with noteworthy minimum inhibitory concentration
SAAB Conference Abstracts
(MIC) values varying between 0.50 and 1.50 mg/ml. When
assayed in various combinations, the frankincense and myrrh
oils displayed synergistic (11.11%), additive (41.67%) and
non-interactive properties (45.95%), with no antagonism
noted. When investigating different ratio combinations against
the pathogen Bacillus cereus, the most favorable combination
observed was between Bacillus papyrifera and C. myrrha.
The GC–MS showed that the oils are chemically diverse.
Major compounds for C. myrrha were furanogermacrene
(15.90%) and furanoeudesma-1.3-diene (44.30%), present
only as minor components in C. guidotti. Major compounds
for C. guidotti were (E)-β-ocimene (52.60%) and α-santalene
(11.10%) and (E)-α-bisabolene (16.00%). α-Pinene
(36.10–67.70%) was present in high concentrations in both
B. rivae and B. neglecta. Other major compounds for B. rivae
include σ-3-carene (12.20%) and limonene (12.00). One other
major compound (terpinen-4-ol at 11.30%) was detected for
B. neglecta and only one major compound (octyl acetate at
64.80%) was predominant for B. papyrifera. The historical
and antimicrobial importances of these oils prove to be
extremely promising when examined both independently and
in combination.
Probabilistic approaches to inferring plant extinctions from
herbarium records
K.J. Duffy
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
The probability and time of extinction of taxa are often inferred from statistical analyses of herbarium records. Such spatially explicit, temporally aggregated data may be useful for
identifying historical sighting clusters of endangered taxa in
space and time. Identification of such sighting clusters can
help highlight changes in the historical recording of endangered
taxa. I used two methods to identify sighting clusters in historical records: the Ederer–Myers–Mantel (EMM) test and the
space–time permutation scan (STPS). I applied these methods
to the spatially explicit sighting records of three 3 nationally endangered orchids from the Republic of Ireland: Cephalanthera
longifolia, Hammarbya paludosa, and Pseudorchis albida. Results show that the STPS is a more flexible statistical tool with
sparse historical record data. This is because the STPS can
identify regions that contain sighting clusters because it uses a
flexible scanning window (defined by cylinders of varying
sizes that move over the study area and evaluate the likelihood
of clustering), and it identifies regions with high and regions
with low rates of historical sightings. I show that, coupled
with other probabilistic methods to infer extinction, the STPS
analyses can be used to detect sighting clusters of endangered
species that may be related to regions of extirpation and
under-recording and may assist in the categorization of threat
status.
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Variation in biological activities of leaf extracts of 42
Combretum molle plants collected from different areas in
Gauteng and Mpumalanga
J.N. Eloff, G. Würger
Phytomedicine Programme, Faculty of Veterinary Science,
University of Pretoria, South Africa
C. molle is an important medicinal plant that is used widely
for many indications in several countries in Africa. Combretum
species are also included in the 50 most important medicinal
plants in the African Herbal Pharmacopoeia. One of the major
problems in using medicinal plants that are collected in nature
is uncertainty on the variation in biological activity. We investigated the antibacterial activity of acetone leaf extracts of 42 C.
molle plants collected in different areas in the northern parts of
South Africa against Escherichia coli and Staphylococcus aureus using a twofold serial dilution microplate method. Because
other parts of the Combretaceae contain high tannin concentrations we also determined the tannin content of plants to determine if there is a correlation. In general although there were
some differences in the chemical composition of different extracts and the tannin content, there were little differences in
antibacterial activity of plants collected in different areas. The
average minimum inhibitory concentration against E. coli was
220 μg/ml (SD 70) μg/ml and against S. aureus was 399 (SD
162) μg/ml. The inverse correlation between tannin content
and antibacterial activity was low with R 2 values of 0.183 (E.
coli) and 0.286 (S. aureus). When cultures were incubated for
120 min to determine if the activity was mainly bacteriostatic
or bactericidal there was very little decrease in the activity.
The results indicate that at least in the case of this species environmental factors do not play a major role in the antibacterial
activity and that information obtained for a plant can be extrapolated to other plants. There were some cases where much
higher activities were obtained. If this higher activity is maintained it indicates that it may be feasible to search for chemotypes to propagate for the delivery of high activity plant
extracts.
Projections of regional climate change over southern Africa –
The water balance in a warmer climate
F.A. Engelbrecht a,b
a
CSIR Natural Resources and the Environment – Climate
Studies, Modelling and Environmental Health, Pretoria 0001,
South Africa
b
Climatology Research Group, GAES, University of the Witwatersrand, South Africa
A variable-resolution global atmospheric circulation model
is used to downscale the projections of six different coupled climate models that contributed to Assessment Report Four (AR4)
of the Intergovernmental Panel on Climate Change (IPCC) to
high resolution (about 0.5° in latitude and longitude) over
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southern Africa. All the simulations are for the A2 (business as
usual) emission scenario and for the period 1961–2100. The
variable-resolution model used is the conformal-cubic atmospheric model (CCAM) of the Commonwealth Scientific and
Industrial Research Organisation (CSIRO) in Australia. In
these simulations, CCAM was integrated using a static description of the land-surface (e.g. fields such as the vegetation type
and surface albedo did not vary at an inter-annual time-scale).
Additionally, simulations are shown where the land-surface
responded dynamically to the changing climate. For these simulations, CCAM was applied coupled to the CABLE (CSIRO
Atmosphere–Biosphere Land-Exchange) dynamic landsurface model. The southern African region is projected to
warm rapidly during the 21st century, at about twice the global
rate of temperature increase. For large parts of the interior regions of southern Africa, the climate for the period
2071–2100 is projected to be 4 °C to 6 °C warmer than the climate of the baseline period 1961–1990. This drastic rise in surface temperature is shown to occur in association with a large
increase in potential evaporation. The southern African region
is simultaneously projected to become generally drier in response to enhanced anthropogenic forcing, with only slight
rainfall increases projected to occur over parts of the central
and eastern interior of South Africa. That is, the water balance
over the region is projected to become increasingly negative
under conditions of enhanced anthropogenic forcing.
Seed germination behavior, micropropagation and
Agrobacterium-mediated transformation of Salvia runcinata
(L.f.): implications for conservation and cultivation
S. Figlan a, J.M. Kossmann a, N.P. Makunga a,b
a
Institute for Plant Biotechnology, Department of Genetics,
Faculty of Natural Sciences, Stellenbosch University, Private
Bag X1, Matieland, South Africa
b
Department of Botany and Zoology, Faculty of Natural Sciences, Stellenbosch University, Private Bag X1, Matieland,
South Africa
The seed germination behavior, optimal conditions for
micropropagation and transformation efficiency of S. runcinata
were determined. S. runcinata is particularly rich in rosmarinic
acid and has also been identified as an alternative source of natural α-bisabolol; a compound which is an important component
of cosmetic products, making it highly valued in the cosmetic
industry. Nevertheless medicinal plants of the mint family are
under pressure owing from overexploitation from their natural
environment. The methods of extraction employed are almost
invariably crude and unsystematic. As a result, the roles of exploitation may exceed those of local natural regeneration. There
is thus an urgent need to develop and implement regeneration/
conservation strategies for this sage species. In this study, the
common means of regeneration and propagation of S. runcinata
included in vitro seed germination and micropropagation
methods. The efficacy of smoke and scarification treatments
for germination improvement was tested. Hairy roots were
also established using three different strains of Agrobacterium
rhizogenes (A4T, LBA9402 and C58C1) as an attempt to enhance secondary metabolite production of the plant. The most
effective germination treatment proved to be a 3 min exposure
of seeds to 25% H2SO4 combined with a concentration of
10 − 5 M smoke solution resulting to more than 80% germination. Shoot proliferation was significantly higher using nodal
explants with addition of 4.43 μM BA generally promoting
the average number of shoots per nodal explant. The
LBA9402 strain was more efficient in the establishment of putative hairy root lines. However, only two hairy root clones survived subculturing and polymerase chain reaction with primers
for the genes rolA, rolB, rolC and ags confirmed the integration of T-DNA fragment from the Ri plasmid of A. rhizogenes
to the genome of these clones obtained after transformation by
A4T strain. Southern blot analysis also confirmed the presence
of rolA gene in the two A4T clones.
Elucidation of defense responses associated with inducer
application in Pinus patula
K. Fitza a, A.A. Myburg a, E.T. Steenkamp b, K. Payn c,
S. Naidoo a
a
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
b
Department of Microbiology and Plant Pathology, FABI,
University of Pretoria, Pretoria 0002, South Africa
c
Mondi South Africa, P.O. Box 12, Hilton 3245, South Africa
A major challenge for the pine species in South Africa is the
necrotrophic fungus Fusarium circinatum, which causes the disease pitch canker. Commercial forestry incurs large economic
losses from the pathogen F. circinatum, mostly occurring due
to post planting stress, where 20–30% of the planting stock of
P. patula is lost due to infection annually. One means of enhancing defense is through applying chemicals or biologically derived
treatments known to activate induced resistance, throughout the
entire plant. Induced resistance may involve chemical defenses,
e.g. production of terpenoids, phenolic metabolites, protein defenses such as pathogenesis related proteins and anatomical defenses such as cell wall lignification. A panel of 10 different
inducers were chosen to determine their efficiency in activating
induced resistance in P. patula. The application of chitosan at
a concentration of 10 mg/ml resulted in significant reduction
in lesion length over a 6 week period after challenge with
F. circinatum. Subsequent characterization of the molecular
basis of induced resistance was achieved by analyzing the expression profiles of selected putative defense genes. These P. patula
putative orthologs were identified based on Expressed Sequence
Tag (EST) sequences available from Pinus taeda using a phylogenetic approach. Reverse transcription-quantitative PCR assays
revealed that phenylalanine ammonia lyase (PAL) showed a fourfold up-regulation in P. patula seedlings treated with chitosan
SAAB Conference Abstracts
compared to un-treated plants, suggesting the onset of induced
resistance. Chitosan application may hold promise in inducing
resistance in P. patula against F. circinatum and could form
part of an integrated management strategy to control the disease.
Comparative wood anatomy of six genera of the family
Bignoniaceae in Nigeria
A.E. Folorunso, O.S. Awosika
Botany Department, Obafemi Awolowo University, Ile-Ife,
Nigeria
Comparative wood anatomy of six genera of Bignoniaceae
in Nigeria were carried out to assess the taxonomic and diagnostic characters from the wood samples of the selected genera,
identify the primitive characters and the species possessing
them, investigate the phylogenetic relationship among members of the family and use the wood characters in producing a
key for easy identification of the species of Bignoniaceae.
Wood specimens were collected from different latitudes and
ecological zones such as the wet forest, dry forest and derived
savanna areas of Nigeria and assigned accession numbers.
Small pieces of the species were macerated in Schutz's fluid;
a mixture of equal 10% solution of Chromium trioxide and
10% solution of concentrated nitric acid, stained in 1% Safranin
O and mounted on a slide using dilute glycerol as a mountant.
The dimension and anatomical characteristics of the vessel elements and fibers were described respectively. The length and
diameters of twenty vessel elements and fibers were measured
from the macerated materials; fiber-length and vessel-length
ratio (F/V ratio) was also calculated. Small block of about
1 cm × 1 cm × 1 cm were removed from the wood samples;
transverse, tangential and radial longitudinal sections were
made on Reichert Sledge Microtome at varying thickness between 8 and 15 μm. The sections were stained in 1% solution
of Safranin O for 15 min, washed in three changes of water,
counter-stained in 1% alcian blue for 3–5 min, dehydrated
through series of ethylalcohol: 30, 50, 70, 90 and 95%, cleared
in xylene and mounted in DPX mountant. Photomicrographs of
the wood sections were taken with Leitz camera mounted on
Dialux research microscope. The wood is diffuse porous and
shows the presence of growth ring in all the six genera. Diagnostic wood characters are mainly confined to perforation
plates, vessel length, fiber types, ray types and number of adjoining vessel members. Major primitive characters shown include presence of more tracheids, elongated and narrow
vessel elements, highly oblique end wall, vessel angular in
shape and more solitary vessels in transverse section distribution. Phylogenetically, Tecoma stans and Crescentia cujete
are the highly primitive members, Stereospermum acuminatissimum and Markhamia tomentosa are highly advanced species
while the position of Newbouldia laevis and Spathodea campanulata is intermediate.
185
An analysis of landscape connectivity of the Grassland
Biome of Mpumalanga using graph theory
L. Fourie a , M. Rouget a, M.C. Lötter b
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Mpumalanga Tourism and Parks Agency, Private Bag X1088,
Lydenburg 1120, South Africa
The South African Grassland biome is one of the most
threatened biomes in South Africa. According to National
Land Cover data, 45% of the Grassland biome area is transformed, degraded or severely invaded by alien plants and the
remaining natural areas are highly fragmented. The connectivity between habitat patches is very important for populations to
survive in this fragmented landscape and the analysis and quantification of this connectivity can be used for reserve design and
to direct conservation efforts. The aim of this study is to analyze connectivity in the grassland biome of Mpumalanga
using graph theory. Graph theory-based connectivity indices
have the ability to combine spatially explicit habitat data with
species specific dispersal data and can quantify structural and
functional connectivity over large landscapes. Natural areas
were identified using 2008 land cover data for Mpumalanga.
This study shows the level of connectivity of the Grassland
Biome of Mpumalanga for different grassland species with dispersal distances ranging from small to large. The habitat
patches most important for maintaining connectivity in this
area are identified. Additionally, the importance of protected
areas as well as the importance of abandoned croplands for
maintaining overall connectivity is demonstrated. These results
can be used to inform management decisions and reserve design in this biome.
Employing biotechnology and cryobiological research to
conserve threatened plant species
M.M. From, M. Landry
Laboratory for Endangered Plants, Centre for Conservation &
Research, Omaha's Henry Doorly Zoo, Omaha, Nebraska
68107, USA
Plant biotechnology developed in the 21st century can serve
as a means to forestall the final extinction of many plant species. The vast majority of plant species on earth today have
not yet been researched for their possible benefits to mankind
and all other life forms. Omaha's Henry Doorly Zoo established
an ex situ plant laboratory to research plant species from threatened habitats and reintroduce propagules of those species in
their original habitats. Sustainable populations are thus created
by increasing the total number of specimens at a given site. As
an example, 0ver 840 endangered native orchid species, representing 5 genera: Aeranthes spp., Aerangis, spp., Bulbophyllum
spp., Calanthe sp., and Cryptopus sp. (13 species) have been
reintroduced into Madagascar in collaboration with Malagasy
186
SAAB Conference Abstracts
scientists from CITES and graduate students who have received
biotechnology training in the zoo's laboratory. The head of the
Madagascar forestry department and local residents were collaborators for plant reintroductions made in the rainforest.
Seedling survival, based on the number of plants displaying active shoot and root growth five years after reintroduction, ranged an average of 76%. Samples of seed and spore accessions
from threatened plant species are also preserved in the zoo's
frozen seed bank. Currently, seeds and spores from more than
150 species are in the cryobank, some preserved using novel
techniques developed in the zoo's laboratory, creating a backstop to extinction by saving germplasm for future research projects and long term conservation plans that can eventually lead
to species recovery on a broader scale.
Plant invasions, resilience, economics, and restoration: Can
fynbos pay for alien management?
M. Gaertner a, H. Nottebrock b, H. Fourie c, S.D.J. Privett d,
D.M. Richardson a
a
Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Private Bag X1, Matieland 7602,
South Africa
b
Potsdam University, Plant Ecology and Conservation Biology, Maulbeerallee 2, 14469 Potsdam, Germany
c
Western Cape Department of Agriculture, Private Bag X1,
Elsenburg 7607, South Africa
d
Fynbos Ecoscapes, Witkrans, Gansbaai 7220, South Africa
We explored the influence of different invasive plant species
on the resilience of three different invaded sites in the Cape Floristic Region by testing a variety of management strategies
through field trials and experimental manipulations. To investigate the financial feasibility of introducing native species which
can be used for sustainable flower harvesting as an incentive for
restoration we linked ecosystem services to the beneficiaries of
ecosystem restoration conducting a cost–benefit analysis. Our
results show that the ecosystem was sufficiently resilient to
allow autogenic recovery to occur following removal of the invasive species. Native cover, species richness, diversity or
evenness increased significantly after restoration at all three
sites, whereas alien cover decreased significantly. Soil restoration treatments resulted in a decrease of available nitrogen,
but this had no effect on plant cover (alien or native), species
richness, diversity or evenness. We therefore argue that in this
case soil restoration treatments were futile and added unjustifiable expense to the restoration program. We learned that an
adaptive approach involving revising management objectives
throughout the management process would have been more
appropriate. The financial analysis shows that the density of
invasion is the key determinant influencing whether clearing
of invasive plants and restoration results in a net gain or loss
when land is restored to a state conducive to sustainable
harvesting.
Functional evaluation of a drought-induced “late
embryogenesis abundant” protein gene from cowpea
I. Gazendam a , D. Oelofse a , D.K. Berger b
a
Agricultural Research Council-Roodeplaat Vegetable and
Ornamental Plant Institute, Private Bag X293, Pretoria 0001,
South Africa
b
Department of Plant Science, Forestry and Agricultural
Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
Drought tolerance of plants is governed by multiple genes.
Biotechnology can be applied to improve a crop's drought
tolerance through candidate gene identification, followed by
transformation or molecular breeding strategies. Cowpea
(Vigna unguiculata (L.) Walp) was used as a source of candidate drought responsive genes, since it is a highly drought
tolerant legume crop. A cDNA library, enriched for drought
responsive cowpea genes, was generated following suppression subtractive hybridization of two cultivars differing in
their drought tolerance. DNA microarrays were employed to
identify genes responding to drought stress. A gene encoding
an atypical group 5 late embryogenesis abundant protein
(LEA5) was selected for further characterization. It was
shown to be highly upregulated by drought, application of
the plant stress hormone abscisic acid and other abiotic stress
conditions (salt and cold) in cowpea leaves. LEA proteins
play an important protective role during drought and other
abiotic stresses of plants, but group 5 proteins are not as
well studied as the classical LEA groups. This gene was
therefore over-expressed in the model plant Arabidopsis
thaliana to study its role in tolerance to drought. Seedling
stress tests were performed in vitro in the presence of osmotic
agents (high molecular weight polyethylene glycol) that simulate drought conditions in the soil. Quantitative growth parameters (hypocotyl and primary root elongation) of
homozygous transgenic T4 seedlings were measured and
compared to non-transgenic controls. No statistically significant improvement in growth and recovery after stress could
be attributed to the cowpea LEA5. This LEA protein could,
therefore, not improve the drought tolerance of transgenic
A. thaliana lines. Its possible role in cold stress protection
is suggested as a follow-up study.
Banksia ericifolia invading South Africa as predicted – A
major threat or just symptom of a peculiar fire regime?
S. Geerts a,b, J.R. Wilson a,b, D.M. Richardson a, M. McGeoch a,
M. Gaertner a, J.J. Le Roux a, S. Kritzinger-Klopper a,
C. Muofhe a
a
Department of Botany and Zoology, Centre for Invasion Biology, Stellenbosch University, Private Bag X1, Matieland 7602,
South Africa
b
South African National Biodiversity Institute, Kirstenbosch
National Botanical Gardens, Claremont, South Africa
SAAB Conference Abstracts
In the Cape Floristic Region (CFR) of South Africa there is a
long history of alien invasive Australian plant species. Some of
these species, for example those in the genus Hakea (Proteaceae family), are well adapted and thrive under Fynbos fire regimes and have become widespread invaders. However, many
potentially invasive species are only small infestations and
assessing and controlling these at an early stage is the most
cost effective. Recently, another Australian Proteaceae genus,
Banksia, was listed as invasive in South Africa. With similar
life history traits than Hakeas (serotinous, with large canopystored seed banks dispersed by wind in the post fire invasion
window) Banksias, and in particular B. ericifolia have been predicted to be high risk introductions in fynbos. We assess the
status of all known B. ericifolia populations in the CFR. At
the only site where B. ericifolia has become invasive, we determine the cause of its spread. The invasive population arose
from an ornamental farm hedge planted 30 years ago with sporadic recruitment into the surrounding natural vegetation. It
now covers an area of about 150 ha with approximately
10 000 individuals. The population was mapped and levels of
recruitment and plant size were determined. From these data,
size distribution and time to first flowering and post fire seed
dispersal distances were calculated. The ability to attract local
pollinators in this preferential outcrossing species is discussed.
We present preliminary analyses linking a particular humaninduced fire regime in the immediate area of the invasion to
the observed episodic recruitment. We contrast this to other
sites where B. ericifolia has been grown under different fire regimes, and discuss our results in the light of risk analysis of the
species. Lastly we assess the effectiveness of clearing operations on B. ericifolia.
Phylogenetic relationships within subtribe Terminaliinae
(Combretaceae)
J. Gere a,b, O. Maurin a,b, M. Van der Bank a,b
a
African Center for DNA Barcoding, University of Johannesburg, Department of Botany and Biotechnology, P.O. Box
524, Auckland Park 2006, South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
Subtribe Terminaliinae is a taxonomically and phylogenetic
complex group within Combretaceae. Previous morphological
studies on the family recognized five genera, Terminalia,
Buchenavia, Conocarpus, Pteleopsis and Anogeissus with
Bucida transferred to Terminalia. Recent molecular studies indicated that the largest genus, Terminalia (approximately 200
species) is polyphyletic with the proposal that all genera, except
for Conocarpus, should be transferred to Terminalia. In the current study an extra plastid gene, ndhF, as well as an increased
number of taxa, was added to the existing data set (ITS, rbcL
and spacers trnH-psbA and psaA-ycf3). Within Terminaliinae
three major clades are retrieved: clade I comprises mainly
187
Asian Terminalia and Anogeissus species; clade II includes
Buchenavia, Bucida, Pteleopsis and American Terminalia species, and clade III comprises mainly African Terminalia with a
few Asian and Australian Terminalia species embedded in it.
Conocarpus is supported as sister to the rest of the subtribe.
Plant diversity of a lowland dipterocarp rainforest in
Samar Island, Philippines
W.S.M. Gruezo
Professor 12, Plant Biology Division, Institute of Biological
Sciences, College of Arts and Sciences, University of the
Philippines Los Banos, College 4031, Laguna, Philippines
The plant diversity of a lowland dipterocarp rainforest in
Samar Island, Philippines (i.e. Borongan, Eastern Samar Province) is composed of 485 species in 276 genera and 99 families.
Of the 485 species, 9 species are epiphytes, 24 ferns, 17 grasses,
83 herbs, 43 lianas, 15 vines, 17 shrubs, 91 small trees, 120
medium-sized trees, 53 large trees and 29 tree-like plants. In
terms of economic or functional importance, these 485 species
serve the following uses: 207 landscape plants, 117 timber
sources, 58 ornamentals, 42 for cottage industry, 33 weeds, 25
medicinals, 17 fruit crops, 9 each as fiber and poison sources, 6
pasture and forages, 3 spices, 2 each with edible fruits, for masticatory purposes, ecological functions and soil erosion control, 1
each for beverage, dye source, perfume and animal food. In addition to a number of new species records for Samar Island, one important taxonomic and biogeographic discovery was made,
particularly in the vicinity of Mt. Apoy. This involves the discovery of Falcatifolium gruezoi de Laubenfels, (Podocarpaceae)
known locally as karis-karis (Waray), binaton (Tagalog) and
Gruèzo sickle-leaf (in English). Its discovery represents a new
genus record for Samar Island and also made possible the description of a new forest formation type termed as mixed Falcatifolium
forest, which can only be found in a specific habitat type, here described also as new under the name “pseudo-peat swamp”. The
discovery of another species of conifer, Podocarpus neriifolius
D. Don [malaadelfa (Tagalog), Podocarpaceae] brings the total
number of conifer species in Samar Island to five, thus this particular species is a new species record for the island. In terms of
plant endemicity, the study area which is a part of the Suribao
Watershed has 256 endemic species representing 53% of the
total species record for this particular watershed, which largely
belongs to a lowland dipterocarp rainforest type. This watershed
has a very high plant diversity i.e. its calculated Shannon–Weiner
diversity index (H′) is 4.56 (based on measurements of 25 circular sample plots, each with an area of 1/8 ha).
Towards an understanding of indigenous Afromontane
forest regeneration and expansion in Buffelskloof Private
Nature Reserve, Mpumalanga
W.A. Haddad a, M. Rouget a, A.E. Van Wyk a, J.E. Burrows b
188
SAAB Conference Abstracts
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Buffelskloof Herbarium, P.O. Box 710, Lydenburg 1120,
South Africa
Several recent studies show a marked increase of woody vegetation in many different biomes across the globe. The aim of this
honors project was to understand forest regeneration under different land uses and to quantify the spatial extent of indigenous Afromontane forest over time in the Buffelskloof Private Nature
Reserve, Mpumalanga, South Africa. A time series of aerial photographs from 1956, 1981 and 2004 was constructed in a GIS and
used to locate and quantify the areas converted from grassland
and pine plantations to indigenous woody communities. A marked
increase in woody cover was found in some areas, while the forest/
grassland interface remained stable in other areas. A total of four
10 m × 10 m plots were investigated, two located in former grassland and two in areas that were under pine plantations up to twenty
years ago. Further, two 100 m transects were recorded through an
area of former grassland and an area of former plantation. None of
these areas have been burnt in the past two decades. Investigation
was made into the reproductive and dispersive biology of some
of the most commonly encountered species in an effort to see
whether this has an effect on which woody species colonizes an
area first. From the results it seems that there is not a major difference between the species and structural compositions of plots located on areas with different vegetation histories (grassland vs.
plantation), but that other factors such as distance to established
forest (seed source), soil moisture and aspect has a greater influence. This study and further work along these lines can be of
great value in the rehabilitation of old commercial plantations to indigenous Afromontane forests along the Escarpment.
Root endophytes from Persea americana and their role
against Phytophthora cinnamomi infection
J.D. Hakizimana a,b, M. Gryzenhout e, T.A. Coutinho a,d,
N. Van den Berg a,c
a
Forestry and Agricultural Biotechnology Institute (FABI),
University of Pretoria, Pretoria 0002, South Africa
b
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
c
Genetics, University of Pretoria, Pretoria 0002, South Africa
d
Microbiology and Plant Pathology, University of Pretoria,
Pretoria 0002, South Africa
e
Department of Plant Sciences, University of the Free State,
South Africa
Endophytes are microorganisms that, during a viable period
of their life, symptomlessly colonize the living internal tissues
of plants. Root endophytes have been investigated in plants
and used as biocontrol agents against plant pathogens. However, little is known about the diversity of endophytes in
P. americana (avocado) roots and their potential role in biocontrol of P. cinnamomi (Pc). This Oomycete is the causal agent of
Phytophthora root rot, the most important disease in avocado
producing countries worldwide. The aim of this study was to
identify bacterial and fungal endophytes from avocado roots
and to use selected endophytes with potential biological activity
against P. cinnamomi in planta. The identification was based on
morphological characteristics of the isolates as well as using
ITS, β-tubulin, EF-1α and 16S ribosomal RNA gene sequencing. Twenty four different fungal species and 8 bacterial species
were identified as endophytes from the avocado roots from various locations in South Africa. Two bacterial strains and 2
fungal strains were selected on their antagonistic effects against
P. cinnamomi. Clonal as well as endophyte-free tissue-cultured
avocado plants were inoculated with each of the selected endophytes at 10 8 CFU ml - 1 for bacteria and 10 6 spores ml - 1 for
fungi. Four weeks after endophyte inoculation, each plant received 10 5 Pc zoospores ml - 1 directly sprayed onto roots, except for negative control plants. Positive control plants
received no endophytes. Phytophthora symptoms were assessed
21 days post infection and disease incidence was calculated.
Avocado plants that received endophytes prior to Pc-infection
showed a significant decrease in disease incidence with ratings
from 2-40% compared to 94-100% for the positive control
plants that received no endophytes.
Endophytes and their association with Dichapetalaceae
C.B.S. Hendriks a, J.J.M. Meyer a, C.F. Van der Merwe b
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Laboratory for Microscopy and Microanalysis, University of
Pretoria, Pretoria 0002, South Africa
Dichapetalum cymosum (Poison leaf) is a very common
problem plant in southern Africa. Fluoroacetic acid, is believed
to be the poisonous entity in the plant, might be produced by
the plant, but the micro-organisms associated with this plant
may also play a role in the production thereof. By isolating
the bacteria the capabilities of the isolated endophytes to synthesize fluorinated compounds were studied. It is suggested
from preliminary results that symbionts might play a role in
the synthesis of the poisonous entities in the Dichapetalaceae
family, but further investigation is required. The detection of
glandular lesions on the abaxial side of the leaf led to closer examination and the cross sections revealed unusually deformed
epidermis cells with adjacent cells containing vacuoles filled
with phenolic-like crystals. Transmission electron microscopy
(TEM) of the spongy parenchyma cells directly above the glandular lesions indicated the presence of clusters of small, viruslike particles (VLPs) in the chloroplasts. Observations by
TEM show that these VLPs have unusual lattice formation, differing from the typical viral-capsid protein arrays and, hence,
the question is posed whether this might be of virus origin.
Tapura fischeri (Leafberry tree) is a tree member of the same
family, and it was found to contain a fluorinated compound.
Endophytes were also found in the plant and similar glandular
SAAB Conference Abstracts
lesions with analogous VLPs were observed at these sites. This
might implicate that endophytes have a share in the biosynthesis of the fluorinated compounds found in Dichapetalaceae. Numerous factors ought to be considered to establish the chemical
ecology of the intricate system regarding the endophytes and
the toxicity of the family Dichapetalaceae.
The taxonomic significance of the cypsela morphology in
the genus Nolletia Cass. (Asteraceae) in southern Africa
P.P.J. Herman
National Herbarium, South African National Biodiversity
Institute, Private Bag X101, Pretoria 0001, South Africa
189
model (University of Basel), it was established that six species
had significant anti-HIV activity ranging between 12 and
21 μg/ml (IC50). Subsequent toxicity tests also revealed little or
no toxicity for these extracts. With the use of NMR-based
metabolomic analysis the search for active constituents was conducted and areas of interest were identified. Regions 2.55 ppm3.16 ppm, 6.20 ppm-6.40 ppm, 5.72 ppm-6.28 ppm, 6.60 ppm7.00 ppm, 7.24 ppm-8.04 ppm and 8.24 ppm-8.98 ppm were
identified as being the main contributors to bioactivity. The isolation of active constituents will be guided by focusing on compounds having chemical shifts in these regions to identify
possible lead compounds for further studies.
The role of pollinators in the assembly of Erica communities
The genus Nolletia Cass. belongs to the tribe Astereae of the
family Asteraceae. Currently eight species are recognized in
southern Africa. The genus has never been revised and there
is no key available dealing with all of the species. Full descriptions of the species are also scanty or non-existing in the available taxonomic literature. A species was identified as being
toxic to cattle and another species from the Pretoria area was
recognized as a new species. A taxonomic revision of the
genus is currently under way. Based on the cypsela morphology, the genus can be divided into two groups. One group has
plain, flat epidermal cells and longish twin hairs. The other
group has globose epidermal cells each with very small twin
hairs covering the entire surface of the cypsela. In this group
a taxon with a slight variation was observed: it has globose epidermal cells arranged in pairs, each with one twin hair between
them. The paired globose cells are scattered over the cypsela
surface.
Determination of anti-HIV active constituents of
Helichrysum species by means of metabolomics
H.M. Heyman a, V. Maharaj b, C. Kenyon b, J.J.M. Meyer a
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Biosciences, CSIR, P.O. Box 395, Pretoria 0001, South Africa
Being the home to more than 35% of the world Helichrysum
species (c.a. 244 species) of which many are used as traditional
medicine it is only fitting that research into these species should
be conducted in South Africa. The most commonly used Helichrysum species for their medicinal properties are Helichrysum
cymosum, Helichrysum odoratissimum, Helichrysum petiolare
and Helichrysum nudifolium. The medicinal uses include the
treatment of coughs, colds, fever, infection, headaches, menstrual pain and they are very popular for wound dressing. In
previous studies conducted on 12 Helichrysum species, it was
clear that some species have significant anti-HIV activity
(5-12 μg/ml). In this current study another 35 randomly selected Helichrysum species were collected and tested for anti-HIV
properties. Using an in-house Deciphr method on a full virus
A. Heystek, A. Pauw
Department of Botany and Zoology, Stellenbosch University,
Private Bag X1, Matieland 7602, South Africa
Plant-pollinator interactions are proposed to be one of the main
factors responsible for the diversification and maintenance of the
exceptional plant species richness of the Cape Floristic Region.
We investigated the role that pollinators play in the assembly of
Erica communities since 426 members of this genus are crammed
into a small area in the south-western Cape and they display a
range of pollination syndromes (80% entomophilous, 15%
ornithophilous, 5% anemophilous). Vegetation plot data from
ten regions in the fynbos biome was used to test whether the frequency of co-occurrence of species with the same pollination syndrome differs from a null model of random community assembly.
We found that Erica communities were assembled randomly with
respect to pollination syndrome in six regions, but were significantly overdispersed in four regions. Overdispersion is consistent
with competition for pollinators between co-flowering species. To
better understand these ecological processes, we conducted field
experiments with six Erica species that are all primarily pollinated
by the Orange-breasted Sunbird Anthobaphes violacea. We transplanted inflorescences of a focal Erica species into communities
containing another ornithophilous Erica species and recorded pollination rates in the transplanted and resident species in relation to
the floral density of the resident species. In five cases pollination
rate in the transplanted species was not related to the floral density
of the resident species. However, there was one case of inter- and
intraspecific competition for pollinators and one case of intraspecific pollination facilitation. Our investigation of patterns and processes of Erica community assembly concur that pollination can
structure communities in non-random ways with potential for
both facilitation and competition.
The role of resource limitation in the occurrence and
persistence of rewardless pollination systems in Disa
(Orchidaceae)
N. Hobbhahn a,b, B. Bytebier, S.D. Johnson a, L.D. Harder b
190
SAAB Conference Abstracts
a
School of Life Sciences, University of KwaZulu-Natal, Private
Bag X01, Scottsville 3209, South Africa
b
Department of Biological Sciences, University of Calgary,
2500 University Drive NW, Calgary, Alberta T2N0N5, Canada
Pollination by deceit, whereby flowers do not offer any rewards to their pollinators, is frequently explained as a means
of avoiding the resource costs of reward production, especially
when resources are limited. To mitigate fitness losses due to reduced attractiveness, rewardless species may allocate more resources to other floral functions that promote reproduction,
such as display size, floral longevity, or gamete production.
Given the lack of estimates of the resource costs of reward production in lineages with deceitful species, the role of resource
limitation in the occurrence and persistence of rewardlessness
remains unclear. We assessed this resource-limitation hypothesis of rewardlessness with a phylogenetically controlled comparison of the energy costs of flower production and
maintenance, and nectar production in the African orchid
genus Disa, in which nectar production has evolved at least
seven times from rewardless ancestors. The costs of 24-h nectar
sugar production and maintenance are minute compared to
those of flower production, but can accrue considerably due
to floral longevity. However, pollination-induced wilting following earlier and more frequent pollinations of rewarding
than of rewardless flowers limits cost accrual in a higher proportion of rewarding than rewardless flowers. We detected no
trade-offs between nectar production and other floral traits in
rewarding species, which invested more energy overall than
rewardless species in reproduction. Overall greater resource investment in reproduction in rewarding than in rewardless species suggests that the resource costs of reward production
may not be limited to the costs of the actual rewards. Instead,
reward production may be associated with a life history that
trades off present reproduction against long-term survival,
whereas rewardless plants may live longer due to lower reproductive investment per season. Transitions from rewardlessness
to reward production may be hampered by lower efficiency of
resource acquisition in rewardless than in rewarding species.
Iris pseudacorus L. (yellow flag) has escaped cultivation in
South Africa
T.P. Jaca
Early Detection and Rapid Response Programme, South
African National Biodiversity Institute, Private Bag X101,
Pretoria 0001, South Africa
The majority of plants that have been introduced to South
Africa perform the purpose for which they are intended and therefore benefit humans in multiple ways. A small portion of introduced plants, however, escape from cultivation. While most
introduced plants will not establish populations outside of cultivation, some probably will become invasive. I. pseudacorus native to Eurasia was introduced sparingly to South Africa as an
ornamental plant. The aim of the study was to examine if
I. pseudacorus has escaped cultivation or if it is still contained
under cultivation. Surveys were conducted in three provinces of
South Africa, Gauteng, Limpopo and KwaZulu-Natal. The results indicated that I. pseudacorus has escaped from cultivation
to wetlands, rivers and other moist habitats, where it makes brilliant yellow displays during spring to early summer. In most of
the areas surveyed, the first plants probably have arisen from rhizomes discarded or else removed from nearby gardens and nurseries. Subsequent spread has resulted from the breaking up of
rhizomes or from seeds, which are produced in abundance. In
some places his species has stated to spread to such an extent
and forms such a scattered pattern that it has the appearance of
a native plant.
Invasiveness of Opuntia salmiana – Experimental study on
its vegetative and sexual propagation
T.P. Jaca a, H.M. Venter b
a
Early Detection and Rapid Response Programme, South
African National Biodiversity Institute, Private Bag X101,
Pretoria 0001, South Africa
b
Plant Propagation and Rehabilitation Technologies cc, P.O.
Box 99273, Garsfontein East 0060, Pretoria, South Africa
O. salmiana (bur cactus) resembles the well known jointed
cactus (Opuntia aurantiaca) is less spiny with long round cladodes that do not detach that easily. It is native to Chaco of
northern Argentina, South-Eastern Bolivia and Paraguay and
was probably introduced to South Africa as an ornamental.
Plants are shrub like, ± 1 m high, often sprawling with long cylindrical stems 1-2 cm in diameter. During summer the plants
are recognized by small bright red club-shaped fruits which
bear several small 1-2 cm long joints on their tips. Several species of the genus Opuntia e.g. Opuntia imbricata, Opuntia kleiniae, Opuntia phaeacantha and Opuntia rufida, have fruits that
proliferate joints which develop into new plants. These joints
are clonal propagules also known as bulbils and are easily detached by passing animals. They are armed with many small
bristle-like barbed spines which attach easily to fur, clothes or
skin for potential long distance dispersal. Production of attractive red fleshy fruits increases the chances of the bulbils being
spread by frugivores. Plant material collected at Wagpos in
the Brits district of North West province was studied to determine if the species propagates both through sexual and vegetative regeneration. A stereo microscope study showed that
possible viable seeds are produced within the fruits. Vegetative
and seed propagation trials were studied in controlled environments. The regeneration ability of bulbils, cladodes stems, timing of shoot emergence and root emergence were studied.
Seeds were sown in two treatments: in filter paper in petridishes treated with distilled water and sand in the laboratory.
Bulbils and cladodes regenerated well and seeds did not germinate at all in both treatments. It is concluded that bulbils
and cladodes are more crucial than seeds for the spread of
SAAB Conference Abstracts
O. salmiana, contributing to an aggressive increase in population size and the importance of frugivores.
Proteomic analysis of wheat treated with a novel plant
activator
R. Janse Van Rensburg a, G. Kemp b, J.C. Pretorius c, B. Visser a
a
Department Plant Sciences, University of the Free State, P.O.
Box 339, Bloemfontein 9300, South Africa
b
Department Microbial, Biochemical and Food Biotechnology,
University of the Free State, P.O. Box 339, Bloemfontein 9300,
South Africa
c
Department Soil- and Crop- and Climate Sciences, University
of the Free State, P.O. Box 339, Bloemfontein 9300, South
Africa
Plant activators present a new and exciting approach to improve crop production by increasing overall plant health and
yield. The aim of this study was to determine the effect of a
novel plant activator called SS on wheat (T. aestivum) after foliar treatment using shot-gun proteomics. Total protein
extracted from SS treated wheat was separated on SDSPAGE. Polypeptides present in different sections of each gel
lane was digested with Trypsin and subjected to LC-MS/MS
analysis. Expression levels of identified polypeptides were calculated using spectral counting. A total of 365 polypeptides
were identified with 95 showing increased levels following
SS treatment. Preliminary results indicated that SS application
improved the plant's photosynthetic ability with three different
aspects being affected. The proteomic results for selected polypeptide encoding genes were confirmed using qPCR analysis.
The positive influence of SS application on photosynthesis in
wheat was confirmed using chlorophyll fluorescence data.
First report of Coniothyrium stem canker of eucalypts in
Zimbabwe
191
four sites on E. grandis, Eucalyptus camaldulensis, E. grandisx-camaldulensis hybrid clone and Eucalyptus propingua. The
ITS region, exons 3 through 6 of the β-tubulin gene and the intron of the translation elongation factor 1-α gene were sequenced
to identify the causal pathogen. Representative isolates from
Zimbabwe were compared with authenticated isolates of Teratospheria zuluensis and Teratospheria gauchensis. Sequence comparisons identified the pathogens as T. gauchensis. This study is
the first to confirm the presence of Coniothyrium stem canker
on eucalypts in Zimbabwe. Furthermore, it is the first to report
T. gauchensis in Southern Africa.
Using model and manipulated flowers to study pollinatormediated selection
S.D. Johnson
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
Strong selection in the wild has the effect over time of reducing phenotypic variation. To understand the historical influence
of selection, it is therefore often necessary to reintroduce phenotypic variation into populations. This can be done expensively through genetic engineering or much less expensively
through the use of natural hybridization, reciprocal translocations, physical manipulation of the phenotype or even construction of model flowers. We have used simple morphological
manipulations and reciprocal translocations to detect the potential for selection to act on flower color, nectar guides, shape,
scent, protandry, and plant height, and used model flowers to
detect the potential for selection to act on flower color, shape
and scent. Measurement of the male component of fitness remains a challenge and we have refined the Peakall method of
pollinia staining so that we can now track the fate of individual
pollen massulae and thereby estimate male pollination success
in orchids with greater precision.
L. Jimu a,c, S. Chen b, M.J. Wingfield b, E. Mwenje c, J. Roux b
a
Forestry Department, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Private Bag X20,
Hatfield, Pretoria 0028, South Africa
b
Department of Microbiology and Plant Pathology, Forestry
and Agricultural Biotechnology Institute (FABI), University of
Pretoria, Private Bag X20, Hatfield, Pretoria 0028, South
Africa
c
Bindura University of Science Education (BUSE), Private Bag
1020, Bindura, Zimbabwe
J.M. Kalwij a,c, M.P. Robertson b, B.J. Van Rensburg b,c
a
Institute of Ecology and Earth Sciences, University of Tartu,
Tartu 51005, Estonia
b
Department of Zoology and Entomology, University of
Pretoria, Pretoria 0002, South Africa
c
DST-NRF Centre for Invasion Biology, Stellenbosch University, Private Bag X1, Matieland 7602, South Africa
Coniothyrium stem canker, caused by species of Raederiella
(previously Coniothyrium zuluense) is one of the most important eucalypt stem diseases in the southern hemisphere. During
a disease survey conducted in Zimbabwe, symptoms of the
disease, characterized by discrete dark brown sunken lesions,
kino exudation and pockets in the wood, were observed in
Invasive alien plants pose a major threat to biodiversity in
general and to that of montane ecosystems in particular. The
elevational gradient of montane ecosystems offers ample opportunities to study the colonization rate of alien plant species.
Yet to date few such studies exist mostly due to limitations
in research funding and scarcity of long-term monitoring
Rapid colonization by annual alien plants of a high
montane roadside in the Drakensberg, South Africa
192
SAAB Conference Abstracts
programs. This study aimed at filling that gap by annually recording the upper altitudinal limits of alien plant species in the Drakensberg mountain range. From 2008 to 2011 we sampled a
20-km long stretch of the Sani Pass road covering an elevational
gradient of 1500-2874 m above sea level. The average alien species richness did not change over time, with 29.5 annual and 42.0
perennial species. With each subsequent observation we recorded
~7 new alien species to the study area. However, only 19 annuals
and 31 perennials were observed annually. A repeated-measures
ANOVA showed a significant change in the upper altitudinal
limits of annuals that was equivalent to an ascend of ~70 m per
year (ANOVA, F = 5.502, dfyear(adj) = 2.340, dferror = 54,
P = 0.005), but not so for the perennials. This rapid ascend
could not be attributed to changes in local climatic conditions,
density of vehicle movements, or minimum residence time of
these alien species in South Africa. Nearly all of our observations
were spatially clustered around potential introduction sources
such as the South African border post or residential dwellings.
Therefore, the large number of new and disappearing species in
combination with rapidly ascending upper altitudinal limits
around potential introduction sources suggests that propagule
pressure is high and that the process of colonization and distribution is still ongoing. These results also suggest that an observation
period of five years is already sufficient to detect trends in alien
plant species.
Quality control of commercially important essential oils and
biological activities of selected oils from South African flora
G.P.P. Kamatou a , M. Sandasi a, S.F. Van Vuuren b,
R.L. Van Zyl b, A.M. Viljoen a
a
Department of Pharmaceutical Sciences, Faculty of Science,
Tshwane University of Technology, Pretoria, South Africa
b
Department of Pharmacy and Pharmacology, Faculty of
Health Sciences, University of the Witwatersrand, Parktown,
South Africa
Essential oils are volatile compounds isolated from aromatic
plants. Like any other product intended for commercial purpose, essential oils sold on the market should meet prescribe
standards for safety and efficacy in order to give the desired effect to consumers. The quality control of five essential oils including frankincense (B. rivae), buchu (Agathosma betulina),
cape chamomile (Eriocephalus tenuifolius), geranium (Pelargoniun graveolens) and tea tree (Melaleuca alternifolia), will
be discussed with regard to the major constituents used to determine “good oil”. The oil is usually evaluated based on the relative percentage calculated from the FID detector. Limitations
of the use of relative percentage area, rather than quantification
based on calibration curves, will be highlighted. In addition, the
biological activities (antimicrobial, antimalarial and anticancer)
of the oils isolated from selected South African aromatic plants
(e.g. Vitex spp., Salvia spp.) and the problems encountered
when investigating their biological properties will be discussed.
In situ and ex situ soil respiration in natural, invaded, and
cleared toposequences in the Fynbos Biome
O.K. Kambaj a, S.M. Jacobs a, K.B. Mantlana b
a
Department of Conservation Ecology and Entomology, Stellenbosch University, Private Bag X1, Maitieland 7602, South
Africa
b
Climate Change and Bio-adaptation Division, South African
National Biodiversity Institute, Kirstenbosch Research Centre,
Private Bag X7, Claremont 7735, Cape Town, South Africa
A. mearnsii, Acacia longifolia, and Acacia dealbata are
among the most widespread alien invasive plants in South Africa
and are often located within riparian catchments with extensive
woody stands that dominated areas. These invasions may be significant to the overall catchment carbon cycling as soils are often
high in soil organic matter and elevated biological productivity
due to the availability of nutrients and water in riparian environments. As such seasonal soil respiration measurements were conducted in selected riparian ecotones of the Western Cape, South
Africa, with differing invasion status: natural, invaded, and
cleared riparian zones. Soil respiration at all sites and within all
landscape positions showed significant seasonality, with highest
and lowest values observed during the warm and dry season
and the wet season, respectively. Of all environmental factors,
Rs were most closely related to soil temperature, while high soil
water content during the wet season seemed to inhibit soil respiration. In general soil water content alone was poorly correlated
to Rs while a combination of both factors provided a strong relationship with soil respiration. Overall, Rs rates were significantly
greater (P b 0.05) in the invaded sites compared to the natural and
cleared sites with dry banks showing highest soil respiration
rates, followed by wet banks and the terrestrial area. Within invasion status, mean daily soil respiration ranged from 0.70 to
3.50 g C m - 2 day - 1 in the natural, 1.58 to 6.35 g C m - 2 day - 1
in the invaded, and 0.16 to 3.32 g C m - 2 day - 1 in the cleared
sites. Potential soil respiration, determined in soil microcosms incubated in the laboratory, showed significantly higher Rs in the
soils from invaded sites on day 7 and day 14. This study contributes significantly to the understanding of soil respiration and factors driving soil respiration in fynbos biome, and across
landscapes. The findings in the field suggest that soil microbial
activity increases in riparian areas invaded by Acacia species,
but upon removal of these woody plants a semblance of the
pre-invasion state may return over time, though the work on
soil microcosm reveals that some differences may remain.
Breeding and pollination systems in Clivia (Amaryllidaceae)
I. Kiepiel, S.D. Johnson
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
Clivia (Amaryllidaceae), a small genus of evergreen perennials endemic to southern Africa, has received considerable
SAAB Conference Abstracts
horticultural and taxonomic attention. Most of the species possess pendulous tubular flowers and are thought to be pollinated
by birds. Clivia miniata is recently diverged and has uprighttrumpet shaped flowers consistent with butterfly pollination.
This study investigates the reproductive biology of C. miniata
and the robust form of Clivia gardenii, also known as Clivia robusta. We document the self-incompatibility systems, floral
traits, pollinators, and natural levels of fecundity in these species, and interpret the findings in the context of the phylogeny
of Clivia and its close relatives.
Aloe section Purpurascentes: The need for a new classification
R.R. Klopper a,c, O.M. Grace b, A.E. Van Wyk c, G.F. Smith a,c
a
Biosystematics Research & Biodiversity Collections Division,
South African National Biodiversity Institute, Private Bag
X101, Pretoria 0001, South Africa
b
Jodrell Laboratory, Royal Botanic Gardens, Kew TW9 3AB,
Surrey, United Kingdom/Marie Curie Fellow, Department of
Medicinal Chemistry, University of Copenhagen, Universitetsparken 2, Copenhagen 2100, Denmark
c
H.G.W.J. Schweickerdt Herbarium, Department of Plant
Science, University of Pretoria, Pretoria 0002, South Africa
Southern Africa is a center of diversity for the genus Aloe
L. and the region harbors ± 150 members of this genus that
has ± 600 species in total. Many societies utilize aloes for a
multitude of biocultural uses, and these succulent plants are
immensely popular among plant collectors and horticulturalists. Aloe section Purpurascentes Salm-Dyck is restricted to
South Africa and Namibia and is characterized by acaulescent
or caulescent plants with densely rosulate ensiform leaves
and cylindrical flowers with free segments in cylindrical to
conical racemes on simple or up to 8-branched inflorescences. Currently this section is usually treated as comprising
six species, namely Aloe framesii L.Bolus, Aloe gariepensis
Pillans, Aloe khamiesensis Pillans, Aloe knersvlakensis
S.J.Marais, Aloe microstigma Salm–Dyck and Aloe succotrina Weston. A taxonomic revision of Aloe section Purpurascentes is underway as differing views regarding the
demarcation of species exist. Matters in need of clarification
include: populations of A. microstigma in southern Namibian
were described under the name Aloe juttae Dinter in 1923,
but were alleged to be conspecific with A. microstigma in
1974; A. khamiesensis is sometimes included as a synonym
of A. microstigma subsp. microstigma while A. framesii is reduced to subspecific rank [A. microstigma subsp. framesii
(L.Bolus) Glen & Hardy]. Furthermore, several morphologically distinct populations of aloes belonging to this section,
which warrant possible description as new taxa, are known.
New comparative data will be presented based on field studies, evidence from morphology, ecology and biogeography,
as well as DNA-based phylogenetic analyses.
193
‘Toxic nectar’: harmful and beneficial effects of nicotine on
an important pollinator, the African honeybee
A. Köhler, C.W.W. Pirk, S.W. Nicolson
Department of Zoology and Entomology, University of
Pretoria, Pretoria 0002, South Africa
Nicotine, best known from the Solanaceae, is a plant defense
metabolite and highly toxic to most herbivores. The presence of
nicotine in floral nectar and pollen seems paradoxical, and the
use of nicotine and neonicotinoid insecticides on agricultural
crops has been suggested to contribute to the pollinator declines
that are currently observed internationally. We examined the effects of nectar nicotine on honeybee (Apis mellifera scutellata)
foraging choices and longevity. Using preference tests on freeflying honeybees, we showed that the dose-dependent deterrent
effect of nicotine is stronger in more dilute nectars. Secondary
metabolites (SM) may act as partial repellents that keep pollinators moving between plants and ensure outcrossing. Plants with
nectar SM may be more attractive to pollinators when flowering in isolation or secreting concentrated nectar, and pollinators
can avoid intoxication by foraging on multiple nectar sources.
We found that caged honeybee worker groups tolerate naturally
occurring nectar nicotine concentrations (≤30 μM) in 0.63 M
sucrose, but survival decreased on high dietary nicotine
(300 μM). Honeybees injected with E. coli lipopolysaccharides
showed even lower survival when fed nicotine, suggesting that
the combined effect of immune challenges and dietary toxins
can be detrimental to colony fitness. However, antimicrobial
properties of nicotine may also be beneficial to honeybees:
weak workers (possibly affected by a bacterial brood disease)
and workers infested with parasitic Varroa mites (known to
transmit viral diseases) demonstrated prolonged survival on
nicotine diets. A possible exploitation of nectar SM for therapeutic purposes may help to explain the role of these compounds in mediating interactions between plants and their
pollinators.
The Carotenoid Cleavage Dioxygenase (CCD) gene family
in Vitis vinifera L.
J.G. Lashbrooke, S.J. Dockrall, P.R. Young, M.A. Vivier
Institute for Wine Biotechnology, Department of Viticulture
and Oenology, Stellenbosch University, Matieland 7602,
South Africa
In plants carotenoids perform crucial roles in photosynthesis, and also serve as the precursors for apocarotenoids: a
group of compounds with diverse biological functions. Enzymatic cleavage of carotenoids by the carotenoid cleavage dioxygenase (CCD) family has been shown to produce volatile
flavor and aroma apocarotenoid compounds (e.g. β-ionone,
geranylacetone, pseudoionone, α-ionone and 3-hydroxy-βionone), as well as the phytohormone, strigolactone. Here we
identify and characterize the grapevine CCDs involved in
194
SAAB Conference Abstracts
apocarotenoid production: CCD1, CCD4a and CCD4b.
VvCCD1 has previously been observed to catalyze the in
vitro cleavage of zeaxanthin and lutein while we show that it
is additionally able to cleave β-carotene. V. vinifera lines
were transgenically altered for CCD1 expression through an
RNAi-mediated gene silencing strategy and overexpression of
the CCD1 gene. A transgenic grapevine population showing a
12-fold range of VvCCD1 expression was generated and metabolically characterized. Photosynthetic tissue (leaf) from these
lines was analyzed for carotenoid and apocarotenoid content
via RP-HPLC and HS-SPME-GC/MS, respectively. Results
indicate that a large amount of control is exerted on VvCCD1
activity, both post-transcriptionally and possibly by means of
subcellular compartmentalization. Since weak correlation between VvCCD1 gene expression and apocarotenoid production
was observed, it appears that the in planta action of VvCCD1,
certainly in photosynthetic tissue, is distinct from the demonstrated in vitro activity. Identification, isolation, expression
and functional characterisation of VvCCD4a and -4b provide
alternative mechanisms for carotenoid cleavage in V. vinifera
L. and an explanation for the divergence between the reported
in vitro and the in vivo activities of VvCCD1.
The systematic value of flower structure in Crotalaria and
related genera of the tribe Crotalarieae (Fabaceae)
M.M. Le Roux, B.-E. Van Wyk
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
Molecular systematics have recently provided a major step
toward a profound insight into generic relationships, thereby
creating the opportunity to re-evaluate the taxonomic and functional significances of flower structure in the tribe, with emphasis on the large genus Crotalaria. Flowers in the tribe
Crotalarieae are generally adapted to bee pollination mechanisms. A representative sample of flowers from 211 species
was dissected to record morphological character states. Six
structural–functional flower types were identified: (1) pump;
(2) gullet; (3) hugging; (4) saddle; (5) tunnel and (6) brush (saddle and tunnel types described here for the first time). Crotalaria uniquely has the brush type; specialized flowers
characterized by a rostrate keel, highly dimorphic anthers, stylar trichomes and four types of elaborate callosities on the standard petal: (1) ridge callosities – vertical swellings on blade and
claw; (2) disc callosities – sub-circular swellings on the blade;
(3) columnar callosities – cylindrical protruding appendages on
the blade; and (4) lamelliform callosities – plate-like protruding
appendages on the blade. Remarkably, Crotalaria and Bolusia
are the only genera of the tribe Crotalarieae with callosities present in all of the species. In other genera, callosities are generally absent or infrequent. Trends toward specialization are
apparent as assemblages of specialized flower characters; individual characters are labile and diagnostically less valuable.
Specialized characters often appear to be non-homologous
and a result of convergence. Unique combinations of flower
characters are often useful to support current generic concepts
in Crotalarieae. The shape of the callosities in Crotalaria is diagnostically important to distinguish between unspecialized
and specialized infrageneric groups and is congruent with the
molecular phylogeny.
Regulation of moss development by strigolactones
B. Lebouteiller, C.W. King, J. Kossmann, P.N. Hills
Institute of Plant Biotechnology, Department of Genetics,
University of Stellenbosch, Private Bag X1, Matieland 7602,
South Africa
Physcomitrella patens, an ephemeral moss widely distributed in temperate zones, is an emergent model for non-vascular
plant biology. Because of its simple structure and the intermediate place of mosses in the plant phylogeny, it can be used
as a model system for plant growth studies. In the gametophyte
stage, the moss colony is formed by two types of filaments, the
chloronemata and the caulonemata, with respectively assimilatory and adventitious roles. Plant hormones, particularly auxin,
act as internal signals to regulate cell differentiation. The predominance of one filament type over the other is also influenced by external factors including nutrition status, such as
the presence of sugars or the source of nitrogen, and light intensity. Analysis of a P. patens mutant deficient in strigolactone
biosynthesis suggested that strigolactones, like auxin, inhibit
protonemal branching. Moreover, the synthetic strigolactone
analog GR24 restores the wild-type phenotype when applied
to the mutant, as in Arabidopsis or rice strigolactone-deficient
mutants. In higher plants, strigolactones participate in the hormonal network which regulates shoot branching and root architecture. Moreover, their effects on the plant development seem
to be highly dependent on the environmental conditions, especially nutrient availability in soils. The place of strigolactones
in this complex signal network might be conserved in nonvascular plants. Our study aims to better understand the roles
of strigolactones in conjunction with other factors regulating
the differentiation of moss filaments. For this, we compared
moss development on different media, with or without GR24.
We have found that some, but not all, hormone effects depend
on the medium composition. This new finding suggests that this
model system is suitable to investigate the integration of external and internal signals regulating plant development.
How do bird pollinators respond to nectar containing
secondary metabolites?
S. Lerch-Henning, S.W. Nicolson
Department of Zoology and Entomology, University of Pretoria, Pretoria 0002, South Africa
SAAB Conference Abstracts
The function of nectar is to reward pollinators. Plants defend
themselves against herbivores by producing secondary metabolites (SM) and these are also present in nectar of at least 21
plant families. We need to better understand the effects of SM
in nectar on pollinating animals. We investigated how specialist
(white-bellied sunbirds, Cinnyris talatala) and generalist bird
pollinators (dark-capped bulbuls, Pycnonotus tricolor) respond
to fresh and artificial nectar containing SM. Erythrina is an important bird-pollinated genus in Africa and the Americas:
leaves and seeds are rich in alkaloids and nectar in amino
acids. When offered pure nectar of Erythrina caffra and Erythrina lysistemon in choice tests, sunbirds rejected the nectar
of Erythrina species but bulbuls did not. Our experiments
with artificial nectar used nicotine, an alkaloid of the Solanaceae and present in nectar of Nicotiana spp. (3–30 μM). Firstly,
the preference for different nicotine concentrations
(0.1–300 μM) in different sucrose concentrations (0.25 and
1 M) was tested. Birds were deterred by high nicotine concentrations but higher sucrose concentration led to higher nicotine
intake, more so in sunbirds than in bulbuls. Secondly, we tested
if nicotine influences the feeding behavior and patterns of
white-bellied sunbirds. In the presence of nicotine, sunbirds
showed better compensatory feeding at higher sucrose concentrations. Feeding frequency, total time spent feeding and mean
duration of feeding events decreased significantly at a high nicotine concentration (50 μM). If plants have nectar containing
SM, generalist pollinators will be less deterred than specialist
pollinators but the sugar concentration of nectar can influence
this response. High levels of SM had a negative effect on the
feeding behavior of a specialist pollinator, and we did not see
the increase in feeding frequency which might translate to
more efficient pollination.
Systematics of the early diverging Apiaceae tribe
Annesorhizeae with emphasis on the South African genera
A.R. Magee a,b, A.N. Nicolas c, P.M. Tilney b, B.-E. Van Wyk b,
G.M. Plunkett c
a
Compton Herbarium, South African National Biodiversity Institute, Private Bag X7, Claremont 7735, Cape Town, South
Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
Cullman Program for Molecular Systematics, The New York
Botanical Garden, 2900 Southern Blvd., Bronx NY
10458–5126, USA
Annesorhizeae is an early diverging tribe belonging to the
family Apiaceae. The tribe forms part of a paraphyletic assemblage referred to as the protoapioids, defined by the presence of
scattered druse crystals of calcium oxalate in the mesocarp of
the fruit. The tribe currently comprises six genera, four of
which are endemic to South Africa. Within the tribe Annesorhiza, Chamarea, and Itasina have been shown to form a
195
strongly supported clade. The three genera are herbaceous perennials with hysteranthous, summer-deciduous leaves and
periodically-replaced fleshy roots. The hysteranthous leaves
(withering or absent at anthesis), coupled with the poor collection record and the need to either return to the population at
least twice or to cultivate them in order to obtain complete vegetative and reproductive materials, has resulted in the number
of species within these genera being greatly underestimated.
As part of a re-assessment of generic boundaries within the
Annesorhiza clade, extensive field excursions over the last
few years have been undertaken in order to obtain complete
material for morphological, anatomical and molecular phylogenetic studies. This has resulted in the clarification of species
concepts and affinities and several new species have been identified. Within Annesorhiza, the number of species has almost
doubled (12 to 21) and includes two species previously
assigned to the genus Peucedanum. The number of species
within Chamarea has also doubled with at least five new species awaiting formal description. Generic delimitations of the
three genera are explored through phylogenetic analyses for
51 accessions representing 18 spp. of Annesorhiza, 9 spp. of
Chamarea, 1 sp. of Itasina and two outgroup species (Astydamia latifolia, Molopospermum peloponnesiacum). Resolution
within Annesorhiza was poor, but better resolution within Chamarea was obtained. While the monophyly of Chamarea is
well supported, Annesorhiza is shown to be paraphyletic with
the monotypic genus Itasina embedded within.
Taxonomic studies of Ursinia, parachute daisies,
(Asteraceae, Anthemideae) in Namaqualand, South Africa
A.R. Magee a,b, J.S. Boatwright a,b, L. Mucina c
a
Compton Herbarium, South African National Biodiversity Institute, Private Bag X7, Claremont 7735, Cape Town, South
Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
Department of Environment & Agriculture, School of Science,
Curtin University of Technology, G.P.O. Box U1987, Perth WA
6845, Australia
Ursinia is a mainly southern African genus (1 species
extending to Ethiopia) comprising ca. 39 species. They are easily recognized by their often large showy ray florets, paleate involucre, scarious involucral bracts and fruit crowned by a
pappus of large, white spreading scales. The latter character
gives rise to the common name, parachute daisy. The species
are currently divided into two subgenera, Ursinia and Sphenogyne, distinguished most readily by the presence or absence of
appendages on the paleae. While preparing the treatment of
Ursinia for Greater Cape Plants II: Namaqualand-southern
Namib and western Karoo, a high percentage of misidentified
specimens, particularly from Namaqualand, were noted in the
herbarium record as well as an undescribed species uncovered
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from the Kamiesberg. In particular, the delimitation of Ursinia
anthemoides and Ursinia calenduliflora was seen to be problematic. This necessitated a study of the species from this region, the results of which are presented herein. Eight species
are here recognized, two from subgenus Sphenogyne and six
from subgenus Ursinia. The species can be distinguished by a
combination of their life history, presence or absence of appendages on the palea, and shape of the involucral bracts and
their scarious apices.
Towards the in vitro generation of somaclonal variant plants
of sugarcane (Saccharum spp. hybrids) for tolerance to
Fusarium sacchari toxins
T. Mahlanza a,b, S.J. Snyman a,b, M.P. Watt b, R.S. Rutherford a
a
South African Sugarcane Research Institute, Private Bag X02,
Mount Edgecombe 4300, KwaZulu-Natal, South Africa
b
School of Biological and Conservation Sciences, Private Bag
X54001, University of KwaZulu-Natal, Durban 4000, South
Africa
The fungus F. sacchari causes stem rot in sugarcane and
the toxicity of the isolate PNG40 to the stalk borer Eldana
saccharina renders it potentially useful as an endophytic biocontrol agent of this lepidopteran pest. However, its usefulness is restricted due to its pathogenicity on sugarcane. To
produce sugarcane lines tolerant to toxins produced by F.
sacchari, chemical mutagenesis and in vitro selection using
F. sacchari culture filtrates (CF) were utilized. Various selection treatments were established. The first determined the effect of 0–100 ppm CF and at which of the in vitro culture
developmental stages (embryo maturation, embryo germination and plantlets) they were most effective. Incorporation
of CF in the media at either embryo maturation or germination stages resulted in significant callus necrosis, and consequent decreased plantlet yield; percentage callus necrosis
was highest with the latter treatment. Another selection treatment established that root re-growth in plantlets with trimmed
roots was inhibited by 750-1500 ppm CF. The third selection
treatment involved immersing in vitro plantlets in varying
concentrations of F. sacchari conidial suspensions, resulting
in 33.3% and 100% mortality from the 10 3 and 10 5 conidia/ml treatments, respectively. To obtain somaclonal variants, chemical mutagenesis was carried out using ethyl
methanesulphonate (EMS). Calli and potential tolerant plants
were selected using the established CF and inoculation treatments. In order to confirm tolerance to PNG40, plants that
survived all the in vitro CF selection pressures were inoculated with F. sacchari conidia and are currently being observed
for disease symptom development and endophytic colonization. Future work includes verifying of fungal colonization
by staining and re-isolation of PNG40 from plant tissue and
molecular analysis of isolates using inter-simple sequence repeat (ISSR) polymorphisms.
Update on the maize eQTL project
Maize eQTL project consortium
Department of Plant Science, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria; PANNAR
SEED Pty (Ltd.), Greytown; African Centre for Crop Improvement, University of KwaZulu-Natal Pietermaritzburg; Centre
for Proteomic and Genomic Research, Cape Town
The maize eQTL project addresses the broad hypothesis that
phenotypes are controlled to some extent by gene expression
differences between genotypes. The agricultural problem that
the project is focusing on is gray leaf spot (GLS) disease of
maize, caused by the fungus Cercospora zeina. GLS is an economically important constraint for commercial as well as subsistence maize farmers in southern Africa. The project's main
aims are to develop improved maize varieties with quantitative
resistance to GLS as well as gain an understanding of the molecular basis of this type of resistance, particularly the role of
gene regulation. The development of hybrid maize suitable
for agro-ecological zones in southern Africa will be discussed
as well as an update on the characterization of gene expression
differences identified using an eQTL pipeline developed inhouse.
Antibacterial, cytotoxic and mutagenic effects of five
Ochna species
T.J. Makhafola, L.J. McGaw, J.N. Eloff
Phytomedicine Programme, Department of Paraclinical Sciences, University of Pretoria, Private Bag X04, Onderstepoort
0110, South Africa
The antibacterial activity and number of antibacterial compounds present in the acetone leaf extracts of Ochna natalitia,
Ochna pretoriensis, Ochna pulchra, Ochna gamostigmata,
and Ochna serullata, against S. aureus, E. coli, Enterococcus
faecalis and P. aeruginosa were determined using the serial dilution microplate assay and bioautography respectively. Some
of the Ochna species are traditionally used by the Zulu tribe
of South Africa for the treatment of dysmenorrhea, fertility
problems, diarrhea, hemorrhoids, stomach pains and gangrenous rectitis. The cytotoxic effects of the extracts and selective
index values were also determined in monkey kidney cells
(Vero), human hepatocellular carcinoma cells (C3A) and bovine dermis cells using the MTT assay. Furthermore, their potential mutagenic effects were determined using the Ames test
(Salmonella typhimurium TA98 and TA100). The MIC values
of the five extracts ranged from 39 to 1250 μg/ml. Bioautography showed that each extract had at least 1 antibacterial compound and O. gamostigmata had at least 4 active compounds.
The IC50 values of the extracts ranged from 26 to 99 μg/ml.
Overall all the plant extracts had low selective index values
(SI) with SI ≤ 1.3. This is a clear indication of non-selective
toxicity i.e. extracts are toxic to bacteria as well as mammalian
SAAB Conference Abstracts
cell lines. None of the extracts was mutagenic (mutagenic index
values ≤ 1.59 for TA98 and ≤0.92 for TA100). As a result the
extracts may have limited application as ingestible/intravenous
therapeutic agents. It may be useful to evaluate acute toxicity in
animal studies because cellular toxicity does not always equate
to in vivo toxicity. However, the extracts may be useful for the
treatment of topical bacterial infections.
DNA barcoding medicinal plants of South Africa
L.T. Mankga a,b, A.N. Moteetee a,b, O. Maurin a,b,
M. Van der Bank a,b
a
African Centre for DNA Barcoding, University of Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg,
South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
The market and public demand for medicinal plants over the
past few decades has increased dramatically with more than
1000 plant species actively traded for medicinal purposes
throughout South Africa. Intensive harvesting of wild materials
is now acknowledged as a serious threat to biodiversity in this
country. Also the substitution of a valuable commodity (medicinal plant) by a cheaper alternative (other plant species), either inadvertently due to misidentification, or deliberately to cheat
consumers, raises some serious concerns as these adulterants
may not be as effective medicinally or may even be toxic and
cause harm to consumers. To add to the problem many species
are either traded as dried leaf, root, bark products, or extracts
and their identification becomes problematic. In the current
study we targeted the most commonly used medicinal plants in
South Africa and produced a set of herbarium identified
vouchers, a set of barcodes for fast and easy DNA-based species
identification (rbcLa, matK, ITS, trnH-psbA), and illustrations on
how customs officers could use DNA barcoding to identify plant
fragments from species in which trade is controlled by the Convention on International Trade of Endangered Species (CITES).
Fly pollination in the achlorophyllous orchid Gastrodia
similis: does Gastrodia provide a breeding site for its insect
pollinator?
F. Martos a, T. Pailler b, B. Bytebier a, S.D. Johnson a
a
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
b
UMR 53 Peuplements Végétaux et Bioagresseurs en Milieu
Tropical, Université de La Réunion, 15 av. René Cassin,
97715 Saint-Denis cedex 9
Among the vast diversity of angiosperms, only a few taxa
are known to have engaged in a mutualistic interaction with insect pollinators by providing them a breeding site, such as in
197
the case of some Ficus (Moraceae), Yucca (Agavaceae) and
Aristolochia (Aristolochiaceae) species. Orchidaceae are
known for a high diversity and specialization of pollination
syndromes. We specifically report a recent pollination study
on the tropical, achlorophyllous orchid G. similis, which is endemic to La Réunion Island (Mascarene Archipelago). This orchid attracts drosophilid flies for pollination by producing
volatile compounds that mimick fruit odor. We suggest that
this nectarless orchid rewards its insect pollinators by providing
breeding site.
Evaluating antioxidant activity and cytotoxicity of the
selected South African medicinal plant species
N.A. Masevhe a,b, A. Aroke a, L.J. McGaw a, J.N. Eloff a
a
Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Science, University of Pretoria,
Private Bag X04, Onderstepoort 0110, South Africa
b
Department of Botany, School of Mathematics and Natural
Sciences, University of Venda, Thohoyandou 0950, South
Africa
Fourteen different plant species were evaluated for their antioxidant potential using three methods, namely DPPH (1,1diphenyl-2-picrylhydrazyl radical), ABTS + (2,2′ azinobis-(3ethylbenzthiazoline-6-sulfonic acid)), and ferric reducing antioxidant power (FRAP). They were also evaluated for their in
vitro toxicity against Vero cell lines using MTT assay ((3(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide).
Four plant species (29%): Spilanthes acmella, Schkuhria pinnata, Osyris lanceolata and Schotia brachypetala exhibited
high cytotoxic activity against Vero cell lines and had IC50
values of 13.7 ± 0, 19.88 ± 0.001, 21.62 ± 0.007 and 28.34
± 0.001 respectively. However, the IC50 values of these plant
extracts were higher than that of the positive control, Doxorubicin which was 9.87 ± 0 μg/ml. Plant species that was relatively
non-toxic was Faurea saligna with IC50 value of 201.2
± 0.004 μg/ml. The rest of the plant species (64%) had moderate cytotoxicity activity (30 μg/ml b IC50 b 100 μg/ml). Plant
species that had a high level of antioxidant activity in both
DPPH, ABTS and FRAP were O. lanceolata, F. saligna, Acacia caffra and Richardia brasiliensis; and Hippocratea longipetiolata had potent antioxidant activity in DPPH and ABTS
methods while S. brachypetala exhibited radical scavenging efficiency in DPPH assay only and Elaeodendron transvaalensis
had a reducing power activity in FRAP assay only. These plant
species had less antioxidant activity than the controls used. The
rest of the plant species had weak antioxidant activity. The results obtained in this study revealed that a high proportion of
plant species (93%) contained cytotoxic compounds in their
crude extract. On the other hand, medicinal plant species tested
in this study showed some free radical scavenging activities
using three different methods and can be considered as promising
sources of natural antioxidants for medicinal uses.
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SAAB Conference Abstracts
Long-term vegetation change (1900–2010) in the Karoo
Midlands biomes with climate and land use as drivers
change
M.L. Masubelele a,b, M.T. Hoffman b, W.J. Bond c
a
South African National Parks, Cape Research Centre, Scientific Services: Cape Node, End of Tokai Road (West), Tokai
7945, South Africa
b
University of Cape Town, Plant Conservation Unit, Botany
Department, Rondebosch 7701, Cape Town, South Africa
c
University of Cape Town, Botany Department, Rondebosch
7701, Cape Town, South Africa
Global climate predictions suggest aridification due to drought
in the central interior of South Africa. Biomes in this region are
expected to undergo dramatic decline in cover of grasses as
shrubs spread from the Nama-Karoo into the Grassland biome.
Long-term changes in the vegetation within biomes of the Eastern
Karoo Midlands Region were studied using historically repeated
photography. The aim of the study was to understand the direction of change and also quantify the nature of change for the
past 100 years. Using firstly, historical changes in climate variables such as rainfall, drought, temperature and drought were analyzed, secondly, changes in stocking rate between 1910 and
1996 were assessed. Thirdly, 65 repeat photographs were taken
within the region and analyzed in terms of the major changes
that have occurred within key landform units of the area (e.g.
slopes, plains and rivers). We calculated the decadal change in
the cover of grasses, dwarf shrubs, tall shrubs and total cover
within each landform and biome. Results showed no long-term
change in annual rainfall and drought incidence while temperature had increased and evaporation rate was variable. Namakaroo biome sites showed an increase in the incidence of wet periods and an increase in early seasonal rainfall while the Grassland and the Albany thicket biomes showed no significant
changes. Stocking rates within all three biomes declined in the
20th century. Grass cover increased substantially across the region while dwarf shrubs declined in the Nama-Karoo and Grassland biomes. The cover of Tall shrubs increased in Grassland and
Albany thicket biomes. Historical accounts of the region's climate and land use are important since they help to determine
the direction and trajectory of change. Trajectories of change
are opposite in sign to what is anticipated in the latter part of
the 21st century. A long-term monitoring approach, incorporating
historical assessment is needed in order to understand how landscape level processes affect human and ecosystem wellbeing.
Bapedi traditional healers in the Limpopo Province,
South Africa
K.M. Mathibela a, S.S. Semenya a, M.J. Potgieter a, B.A. Egan a,
H.J. Du Plessis a, L.J.C. Erasmus b
a
Departments of Biodiversity and bPhysiology and Environmental Health, School of Molecular and Life Sciences, University of
Limpopo, Private Bag X1106, Sovenga 0727, South Africa
This survey documented aspects related to Bapedi traditional healers' practice such as their social characteristics and
knowledge of relevant legislation and conservation. Sixty four
traditional healers were surveyed via a semi-structured questionnaire across the whole of the Limpopo Province. Results
showed that the vast majority of traditional healers are male,
aged between 41 and 50, with more than 30 years of experience
in traditional healing. The majority have no formal education,
with a minority that managed to reach secondary school. Because of this low level of literacy they tend to shy away from
sources of written information, with the result that none of the
questioned healers had any knowledge of the various national
or provincial environmental legislations. This had a knock on
effect in their view of anything formal, with traditional healers
tending to view conservation efforts that involve procedures
such as permits as obstacles to their practice. Rituals play an integral part of traditional healing, especially prior to plant harvesting. Ancestral guidance stands central in traditional
healing. For example the ancestors are consulted when information is shared; to determine the efficacy of their medicine and to
obtain healing knowledge.
An ethnobotanical survey of mosquito repellent plants in
uMkhanyakude District, KwaZulu-Natal Province, South
Africa
E.J. Mavundza a,b , R. Maharaj a, J.F. Finnie b, G. Kabera c,
J. Van Staden b
a
Malaria Research Unit, Medical Research Council, 491 Ridge
Road, Overport, Durban 4001, South Africa
b
Research Centre for Plant Growth and Development, School
of Life Science, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
c
Biostatistics Unit, Medical Research Council, 491 Ridge
Road, Overport, Durban 4001, South Africa
An ethnobotanical survey of plants used for repelling mosquitoes was carried out in uMkhanyakude district, KwaZuluNatal Province, South Africa. The specific objectives of this
survey were to (1) identify plant species and their parts being
used; (2) determine the condition of plant material used and
the method of application. Data was collected from 60 respondents in five villages in the district using standardized and pretested questionnaires. The study revealed that 13 plant species
are used in the study area to repel mosquitoes; 2 of the plants
remain to be identified. The identified plant species were belonging to 11 genera from 9 families. Meliaceae and Anacardiaceae were the most represented families with two species each.
The most frequently recorded species were Lippia javanica
(91.67%), followed by Aloe ferox (11.67%), Sclerocarya birrea
(5%), Melia azedarach (3%), Balanite maughamii (3%) and
Mangifera indica (3%). Leaves were the most (38%) common
plant part used. The majority (82%) of the plant parts were
used in a dry state. Burning of plant materials to make smoke
was the most (92%) common method of application. Nine
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plant species, namely: A. ferox, Calausena anisata, Croton
menyharthii, S. birrea, B. maughamii, Olax dissitiflora, Trichilia emetic, M. indica, and Atalaya alata are documented for the
first time as mosquito repellents. This documentation provides
the basis for further studies in developing new, effective, safe
and affordable plant-derived mosquito repellents especially
for Africa where malaria is highly prevalent. The study also
plays a part in documenting and conserving traditional knowledge of mosquito repellent plants for future use.
Heterologous expression of RANTES analogues in
Lycopersicon esculentum Mill
K.G. Mawela a,b, E. Chakauya b, R. Chikwamba b
a
Phytomedicine Programme, University of Pretoria, Private Bag
X04, Onderstepoort 0110, South Africa
b
CSIR Biosciences, P.O. Box 395, Pretoria 0001, South Africa
AIDS is one of the most severe, deadly diseases that claimed
lives of many people across the globe. An estimate of 42 million people are found to be living with HIV/AIDS worldwide,
and more than 3 million die every year from AIDS-related sicknesses. Women are the most susceptible people of the pandemic. Hence there is an urgent need for microbicides research
intervention. RANTES analogues are natural ligands for the
CC chemokine receptors such as CCR5 which block HIV infection and have been found to be effective ingredients for microbicides. The current study investigated the expression of
RANTES analogues in plants as an alternative production system for the microbicides. Two RANTES analogues were transiently expressed in L. esculentum Mill via agrobacteriummediated transfection. Magnifection system was used to deliver
the RANTES constructs in L. esculentum species. The
RANTES genes were successfully transfected into four developmental stages of mature tomato fruits for protein expression.
Protein expression was evaluated by ELISA and was detectable
from 3 to 9 day post infiltration (dpi). The highest expression
level was obtained in apoplast at 9 dpi. A gradual decrease in
the expression level was observed from green to red tomato
fruits per construct. 5P12-RANTES construct gave the highest
expression level of about 25 ug/kg. Western blot was conducted to confirm the size of recombinant proteins in L. esculentum species which corresponded with the RANTES
positive controls. Our results highlight the potential usefulness
of plants for the production of RANTES in tomato fruits, a
food/feed crop, for preventive intervention of HIV in humans.
Genotypic and phylogeographic investigation of indigenous
and alien Tamarix species in southern Africa
S.G. Mayonde, G. Cron, M. Byrne
Department of Animal, Plant and Environmental Science, University of Witwatersrand, Private Bag X3, WITS 2050, Johannesburg, South Africa
199
Tamarix (Tamaricaceae) is from the Old World, but has become naturalized and invaded other parts of the world. Tamarix
usneoides is the only species native to southern Africa, but
Tamarix aphylla, Tamarix chinensis, Tamarix parviflora and
Tamarix. ramosissima have been reported as exotic in South
Africa. Tamarix species are hypothesized to be hybridizing
among themselves, and T. ramosissima has been declared invasive. T. usneoides is used for phytoremediation in the mines in
southern Africa as it hyper-accumulates sulphate and metals
from Acid Mine Drainage from Tailing Storage Facilities and
excretes gypsum (CaSO4). Tamarix species are morphologically and ecologically similar, making them very difficult to distinguish and hybridization adds to the taxonomic confusion.
Identification of Tamarix species in South Africa is of great importance because of the invasive potential of T. ramosissima
and also the potential usefulness of T. usneoides. This investigation aims to identify populations of pure T. usneoides that
can be cloned for cultivation for phytoremediation on the
mines, and to reveal the geographic origin of the invasive species (e.g. T. ramosissima) to facilitate a biocontrol programme.
In this study, nuclear and plastid DNA sequence markers are
used to characterize southern African Tamarix species and
their putative hybrids genetically and to assist in recognition
of hybrids. Phylogenetic analyses and analysis of polymorphisms indicate that many of the populations sampled are of hybrid origin, most notably those currently being used on the
mines for phytoremediation. Morphological characters are not
always reliable detectors of hybridization.
Antimycobacterial activity, cytotoxicity and genotoxicity
studies of Ptaeroxylon obliquum and Sideroxylon inerme
leaf extracts
L.J. McGaw, T.J. Makhafola, O.O. Udom, K.T.V. Mayekiso,
J.N. Eloff
Phytomedicine Programme, Department of Paraclinical Sciences,
University of Pretoria, Private Bag X04, Onderstepoort 0110,
Pretoria, South Africa
Two plant species, namely P. obliquum and S. inerme, were
investigated for antimycobacterial, cytotoxic and genotoxic activities following good activity detected in an initial random
screening procedure of a large number of extracts. Acetone extracts of the leaves were prepared and tested in vitro for activity
against Mycobacterium smegmatis and Mycobacterium bovis
BCG. MIC values ranged from 156 to 313 μg/ml. P. obliquum
was relatively cytotoxic to human liver (C3A) cells, with an
LC50 value of 86 μg/ml. The selectivity index (SI) values for
this extract with regard to M. smegmatis and M. bovis BCG
were 0.552 and 0.275 respectively. S. inerme was less cytotoxic, with an LC50 value of 1 039 μg/ml, resulting in promising SI
values of 6.66 for both M. smegmatis and M. bovis BCG. Neither of the two extracts was mutagenic in the Ames test against
S. typhimurium strains TA98 and TA100, without metabolic activation. However, in the comet assay, the two extracts were
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SAAB Conference Abstracts
moderately genotoxic when using tail moment (a measure of
both amount of DNA in the tail and distribution of DNA in
the tail) as an assessment parameter, with P. obliquum showing
a more pronounced effect. This extract may be responsible for
the induction of double stranded DNA breaks and may thus
be a potential mutagen (with a higher% DNA in the comet
tail and short tail length). Isolation of antimycobacterial compounds from these species is currently being undertaken.
Analysis of differential gene expression during the early
stages of rust infection in a sugarcane breeding population
T.T. Mhora a,b, R.S. Rutherford a, D.L. Sweby a, R.M. Jacob a,
L. Makome a, J.W. Danson b
a
South African Sugarcane Research Institute, Private Bag X02,
Mount Edgecombe 4300, South Africa
b
School of Agricultural Sciences and Agribusiness, University
of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
Resistant cultivars are the most effective way of controlling
brown rust of sugarcane caused by Puccinia melanocephala.
Molecular techniques can be used to identify undocumented
rust resistance mechanisms, which can then be utilized in
breeding strategies to develop cultivars with increased resistance and durability. Suppression Subtractive Hybridization
(SSH) was used to identify genes differentially expressed between sugarcane genotypes that are resistant (two groups with
different modes of resistance, each group having three genotypes), intermediately resistant and susceptible to rust. Leaves
were sampled 48 h after inoculation with P. melanocephala.
mRNA for each genotype was purified, pooled into its respective groups and converted into cDNA using the Clontech
SMARTer™ cDNA synthesis kit. Two subtracted cDNA libraries were constructed using a PCR-Select™ cDNA subtraction kit. For Library 1 pooled samples of Susceptible and
Intermediate resistant genotypes were subtracted from Resistant
Group One. For Library 2, Resistant Group Two was subtracted
from Resistant Group One. Subtracted cDNA libraries were
transformed into E. coli. The cDNA inserted using the
pGEM®-T easy vector in individual bacterial colonies was amplified by PCR and showed successfully transformed clones
with cDNA inserts ranging from 200-1300 bp. DNA Sequence
analysis of inserts and BLAST searches for both libraries
revealed that over 70% of the sequences were identified as various disease and drought stress related gene sequences. Library
1 revealed enrichment for serine/threonine kinases, reticulonlike proteins and RNA recognition motifs, domains found in
proteins involved in post-transcriptional gene expression processes. The Mob1 gene was also identified in Library 1.
Mob1 is known to play a role in hypersensitive responses
and in cytokinesis, critical processes in host resistance to pathogens. Processing of Library 2 results is still in progress.
These results show the usefulness of SSH in providing information on gene expression in response to brown rust infection.
This information could be used to develop markers for resistance, having potential application in the breeding and selection programme.
In the right place at the right time: Why some introduced
Proteaceae spread at some sites but fail at many others
D. Moodley a, J.R. Wilson a,b, S. Geerts a,b, D.M. Richardson a,
A.G. Rebelo b
a
Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Private Bag X1, Matieland
7602, South Africa
b
South African National Biodiversity Institute, Kirstenbosch
National Botanical Gardens, Claremont, South Africa
The success of invasive alien plants is attributed to them
overcoming a series of barriers during the introduction–naturalization–invasion process. We explore why certain species are
invasive in some locations, but not in others using Proteaceae
as a test case. Many species of Proteaceae are used as cut
flowers, for hedges and ornamental plants, in landscaping and
for food. Consequently, many species of Proteaceae have had
a long history of introductions to regions outside their native
ranges. Some Australian Proteaceae species are notable invaders, but others are notoriously difficult to cultivate. However, although some species are rather difficult to cultivate, a few
of the Proteaceae introduced to South Africa, particularly
Hakea salicifolia and Banksia integrifolia, have naturalized or
are spreading at some sites, but have failed to naturalize at
many other sites. The Protea Atlas and the Southern Africa
Plant Invasion Atlas were used as initial sources for obtaining
locality information for alien Proteaceae in South Africa. Populations in unmanaged sites were selected, since plants are more
likely to spread at these sites. The extent and abundance of
planted and self-sown plants were determined. Sampling involved mapping the source population(s), and mapping and categorizing the number of naturalized plants into different size
classes, namely seedlings, juveniles and young adults. Data
on the presence of herbivory, time since last fire, presence of
phytophthora, land use, topography, reason for planting, management, seed viability, rainfall, temperature, elevation and
soil type were collected. The status of populations, whether naturalized or non-naturalized, was related to the predictors by
means of generalized linear models in order to determine
which factors facilitate spread. Preliminary results will be
discussed in terms of the importance of site specific factors in
predicting the likelihood of a species naturalizing and these
factors include climate, disturbance, introduction history and
propagule pressure.
The use of bioclimatic modelling in predicting the relative
invasion success of introduced acacias in southern Africa
R.F. Motloung a, M.P. Robertson a, M. Rouget b, J.R. Wilson c,d
SAAB Conference Abstracts
a
Department of Zoology and Entomology, University of Pretoria, Pretoria 0002, South Africa
b
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
c
Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
d
South African National Biodiversity Institute, Private Bag X7,
Claremont 7735, South Africa
The likelihood of successful establishment of introduced
plant species has been predicted using various modeling techniques. Although these models have considerable potential in
risk assessment, this has been rarely tested. We aim to determine how useful bioclimatic models are at predicting the establishment or invasion success of introduced plant species and its
implications for risk assessment. About 69 Australian Acacia
species have been introduced into southern Africa for various
purposes, of which 38 species were introduced for government
forestry trials. Firstly, we compare the introduction success of
each species with respect to climatic suitability. And secondly,
for 15 Australian acacias reported to be invasive in Southern
African Plant Invaders Atlas (SAPIA), we determine whether
bioclimatic models could have successfully predicted their
spread. Bioclimatic models were calibrated using occurrence
datasets from Australia as the native range, and evaluated in
the introduced range using government forestry trials and the
Southern African Plant Invaders Atlas. Models were tested
against independent records by calculating true skill statistic
which quantifies omission and commission errors, sensitivity
and specificity. Bioclimatic models suggest that a large portion
of southern Africa is climatically suitable for Australian acacias. Overall there was a fair agreement between the models
and government forestry trials dataset (specificity of 0.83, sensitivity of 0.68, and TSS score of 0.51). However, the models
poorly predicted the distribution of invasive acacias (specificity
of 0.23).
Antioxidant activities of nine medicinal plants used in
treating inflammatory ailments in Zulu traditional
medicine of South Africa
E. Muleya a,b, A.S. Ahmed b, A.M. Sipamla a , F.A. Mtunzi a,
J.N. Eloff b
a
Vaal University of Technology, Chemistry Department,
Private Bag X021, Vanderbijlpark 1900, South Africa
b
Phytomedicine Programme, Department of Paraclinical
Sciences, Faculty of Veterinary Sciences, University of Pretoria, Private Bag X04, Onderstepoort 0110, South Africa
Inflammation is a complex interaction between proinflammatory and anti-inflammatory mediators in response to
induced negative stimuli in which the former predominates.
Many allopathic medications currently used in alleviating inflammation are associated with some major side effects such
as intestinal and cardiac toxicities. However, medicinal plants
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are also used in many traditional practices against inflammatory
complications. If the active components present in medicinal
plant extract affect the same molecular targets as mainstream
interventions with no side effects, such extracts could provide
attractive and cost-effective alternatives to the conventional
anti-inflammatory agents. Considering the importance of oxidation in inflammatory mechanisms, the free radical scavenging
activities of Pentanisia prunelloides, Pomaria sandersonii, Alepidea amatymbica, Gunnera perpensa, Carissa bispinosa, Artemisia afra, Eucomis autumnalis, Ledebouria revoluta and
Berkheya setifera used to remedy inflammation in Mabandla
Village, KwaZulu-Natal, South Africa was carried out against
ABTS ● + and DPPH ● radicals. Results from both assays indicated that some of the plants had good antiradical properties.
For DPPH ● radical assay, EC50 values ranged between
1.9 mg/l from L. revoluta crude to 467 mg/l from hexane fraction of C. bispinosa. The trend of activity in ABTS ● + radical
scavenging was similar to the DPPH trend. However, P. sandersonii extracts were the most active in this case inhibitory
with EC50 values of 1.27 mg/l for crude extract, 1.66 mg/l for
DCM and 1.27 mg/l for acetone fraction. C. bispinosa crude
extract had the lowest activity against the ABTS ● + and
DPPH ● radicals (190.6 mg/l and 25.45 mg/l respectively).
The good antiradical results obtained for some of the plants indicate that antioxidant activities may contribute to their antiinflammatory potential, therefore validating their traditional
use as therapeutic in inflammatory disorders.
Elucidation and characterization of markers for the
salicylic acid and methyl jasmonate pathways in
Eucalyptus grandis
R. Naidoo a, S. Naidoo a, D.K. Berger b, A.A. Myburg a
a
Department of Genetics and bDepartment of Plant Science,
Forestry and Agricultural Biotechnology Institute (FABI),
University of Pretoria, Pretoria 0028, South Africa
The South African forestry industry relies significantly on
the efficient production of various Eucalyptus species primarily
for their use in manufacturing wood and paper products. Although these trees are relatively sturdy, they can succumb to
diseases caused various pathogens including Chrysoporthe austroafricana. Much of the information pertaining to plant defense stems from model organisms such as A. thaliana and
therefore there is a need to investigate this niche in Eucalyptus.
Among the plethora of defenses, signaling pathways such as
salicylic acid (SA) and methyl jasmonate (MeJA) are triggered
and assist in curbing the spread of the pathogen. Each of these
signaling pathways initiates the expression of a suite of pathogenesis related (PR) genes which have been shown to be
markers for the induction of the signaling pathway. Based on
this premise, the aim of this study was to elucidate and characterize the PR genes associated with SA and MeJA in E. grandis.
Using the genome of E. grandis and a phylogenetic approach,
orthologous markers for the SA (PR1, PR2, PR5) and MeJA
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(PR3, PR4, LOX) pathway were identified based on Arabidopsis sequences. Expression profiling using Reverse Transcription quantitative PCR (RT-qPCR) was performed with these
markers in a dose response and time dependent experiment.
The dose response experiment indicated that 5 mM and
100 μM induced the most significant change in transcript expression for the putative marker genes associated with SA and
MeJA respectively. Additionally the marker genes supported
an antagonistic relationship between SA and MeJA in Eucalyptus as previously described in Arabidopsis. These putative
markers were furthermore investigated in Eucalyptus plants
challenged with C. austroafricana, which revealed a possible
role for SA in the tolerant interaction. This study adds to the
current knowledge of defense responses in E. grandis and provides a stepping stone for understanding plant resistance mechanisms to curb future tree diseases.
Gene conversion of the ribosomal RNA cistron
K. Naidoo a, M.P.A. Coetzee a, E. Steenkamp b, B. Slippers a,
M.J. Wingfield a, B.D Wingfield a
a
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural
Sciences, University of Pretoria, Pretoria 0002, South Africa
b
Department of Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), Faculty of Natural and Agricultural Sciences, University of Pretoria, Pretoria 0002, South Africa
The nuclear ribosomal RNA cistron, comprising of the 18S5.8S-26S gene regions, is most frequently targeted for phylogenetic reconstruction and DNA based identification in the eukaryotic kingdom. Identity among the numerous tandem repeats of
this element are assumed to be maintained through gene conversion. During this process, concerted evolutionary forces are
thought to prevent genes within individual repeat elements from
accumulating mutations. It is, however, not yet known when during the cell cycle this process occurs. By making use of a fungal
model, our overarching aim was to determine if gene conversion
in the ribosomal RNA cistron was as a result of meiotic events,
mitotic events or a combination of both. Ceratocystis manginecans, a haploid homothallic ascomycete, was found, through routine population studies, to have two distinct sequences within the
internal transcribed spacer region of the cistron. These two sequence types were profiled in mitotically and meiotically derived
populations using PCR and restriction fragment length polymorphism. The relative ratios of these two sequence types changed
during mitosis when the fungal isolates were cultured as well as
during meiosis when spores are produced. These changes were
shown to occur more frequently during meiosis than mitosis.
These results thus provide empirical evidence of gene conversion
occurring during both meiosis and mitosis, and not only as previously thought during meiosis. This is the first time that gene conversion of ribosomal RNA repeat elements has been shown
experimentally.
Phytohormone choice and the in vitro development of
eucalypt roots
M. Nakhooda a, M.P. Watt a, D. Mycock b
a
School of Life Sciences, University of KwaZulu-Natal, Durban, South Africa
b
School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Johannesburg, South Africa
Eucalyptus micropropagation has great potential in supplying large numbers of superior but otherwise difficult-to-root
clones for forestry deployment. Studies indicate, however,
that micropropagated plants possess an inferior root system
once acclimatized, compared with those of seedlings and
mini-cuttings. Since adventitious rooting in vitro is often
under the influence of empirically-selected exogenous auxins,
the specific actions of these auxins on root induction and
development needed investigation. The roles of two natural
auxins – indole-3-acetic acid (IAA) and indole-3-butyric acid
(IBA) – were presently investigated, using two eucalypt clones
of differing rooting ability (clone 1 – roots to 87% and clone 2
roots to 45%, when using a standard protocol), in conjunction
with the IAA-specific transport inhibitor 2,3,5-triiodobenzoic
acid (TIBA). It was found that while IBA was able to induce
roots in vitro, subsequent root development and graviperception was dependent on shoot IAA content, as established
using gas chromatography-mass spectrometry (GC-MS). However, owing to its greater stability over IAA, IBA remains the
preferred auxin for adventitious rooting, particularly for
difficult-to-root clones. The apparent inability of poor-rooters
to respond to IAA was therefore investigated using clone 2. It
was found that this clone was not deficient in auxin perception
(using the inhibitor of auxin signal transduction ρchlorophenoxyisobutyric acid – PCIB), nor was its poor rooting properties attributed to auxin conjugation (using the auxin
conjugation inhibitor dihydroxyacetophenone (DHAP)). However, using GC-MS, a strong relationship was realized between
shoot cytokinin:auxin and rootability. Reducing cytokinins
from the pre-rooting culture stages, or using the less stable cytokinin, trans-zeatin, significantly improved the rooting ability
of clone 2 (100% with IAA). This indicated that the phytohormones chosen for eucalypt micropropagation should be based
on phytohormone properties and interactions, with regard to developmental requirements of shoots and roots, rather than in
isolation, based on potency.
In vitro propagation of Cyrtanthus species
B. Ncube, J.F. Finnie, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
Crytanthus (Amaryllidaceae) is a genus of perennial geophytes, endemic to the southern African region. In South
SAAB Conference Abstracts
Africa, the genus represents an important group of monocotyledonous bulbous plants of which the bulbs and flowers are highly sought after for both medicinal and ornamental purposes.
Due to their valuable use in traditional medicine and potential
for the production of novel alkaloids, the three Cyrtanthus species (Cyrtanthus contractus, Cyrtanthus guthrieae, Cyrtanthus
obliquus) have been reported to be declining rapidly in their
natural habitats in South Africa. In recognition of this fact, increasing the population of these plant species through cultivation would be an important strategy for meeting a growing
demand as well as maintaining an ecological diversity. Twin
scales from the three species were cultured on solid Murashige
and Skoog (MS) media with concentrations of 6-benzyladenine
(BA) (0-17.7 μM) and naphthalene acetic acid (NAA)
(0-10.7 μM) under continuous darkness and 16/8 h light/dark
conditions. The best shoot initiation responses were obtained
on MS medium containing 8.9 μM BA and 5.4 μM NAA
under continuous darkness at 25 °C (3.1 shoots/explant) for
C. contractus, 4.4 μM BA and 1.1 μM NAA at 25 °C under
16 h light/8 h dark regime (6.3 shoots/explant) for C. guthrieae
and 6.7 μM BA and 2.7 μM NAA at 25 °C under 16 h light/8 h
dark (1.9 shoots/explant) for C. obliquus. The effects of different concentrations of cytokinins (BA, kinetin and zeatin) on
shoot multiplication were evaluated. The developed micropropagation protocols provide rapid and cost effective ways for
the conservation and domestication of Cyrtanthus species.
Toxicity studies on four Hypoxis species and a commercial
herbal mixture
A.R. Ndhlala a , R. Anthonissen b, G.I. Stafford c,
L. Verschaeve b, J. Van Staden a
a
Research Centre for Plant Growth and Development, School
of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3201, South Africa
b
Toxicology, Scientific Institute of Public Health, Juliette Wytsmanstreet 14, B-1050 Brussels, Belgium
c
Botanical Garden and Museum, Natural History Museum,
University of Copenhagen, Sølvgade 83, DK-1307 Copenhagen, Denmark
Several claims have been made for extracts emanating from
Hypoxis species. These include efficacy as stimulant of the immune system, which has led to the species being given credit
for its health benefits to HIV/AIDS sufferers. Another claim
made for Hypoxis spp. includes their use as agents for slowing
down the growth of certain types of cancer, having a positive
effect in combating colds and being highly effective in alleviating arthritis. These widespread claims have led to the appearance of commercial preparations made of Hypoxis sp.
extracts. Among them the African potato extract TM. Within
the genus, two species, Hypoxis hemerocallidea and Hypoxis
colchicifolia are particularly popular both as African traditional
remedies and for the preparation of herbal teas and tinctures.
Using the comet and micronucleus/cytome and neutral red
203
uptake assays, four Hypoxis species commonly used in traditional medicine in South Africa and an unregistered commercial Hypoxis product were evaluated for their potential
toxicity. The results reflected lack of toxicity in all four
Hypoxis species analyzed as well as in the commercial herbal
mixture. It is, however, important to carry out confirmatory
tests using other tests such as the VITOTOX® test for toxicity
and/or in vivo assays.
Perception and concept on diarrhea treatment amongst
traditional healers of Vhembe District Municipality,
Limpopo (RSA)
T.A. Netshivhulana, M.P. Tshisikhawe
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
The study focused on the perception and the concept of traditional healers on diarrhea in Vhembe District Municipality,
Limpopo Province, South Africa. The study dealt with the understanding and belief system towards diarrhea as per the traditional healers' concept. Data was collected through using
questionnaires establishing patterns towards description of diarrhea and categories of diarrhea. Dietary requirements for diarrheal patients were also recorded. The study revealed that
traditional healers in Vhembe district have a lot of information
on the causes as well as categories of diarrhea and dietary requirements of diarrheal patients. The study showed that traditional healers of Vhembe District have a better understanding
when it comes to the perception and concept of diarrheal
disease.
Bee food: The chemistry and nutritional value of nectar and
pollen
S.W. Nicolson
Department of Zoology and Entomology, University of Pretoria, Pretoria 0002, South Africa
Bees are herbivorous insects, consuming nectar and pollen
throughout their life cycles, and are excellent pollinators as a
result. One of the factors contributing to current declines in
bee populations may be poor nutrition, due to forage loss and
dependence on monocultures, and this may interact with the adverse effects of pesticides and pathogens. I present a brief overview of the chemistry of floral resources for bees and the
implications for their nutrition. Nectar is primarily an energy
source, but in addition to sugars, contains various minor constituents that may, directly or indirectly, have nutritional
significance. Pollen provides bees with the protein, lipids, vitamins and minerals that are essential for larval rearing. Chemical
analyses of pollen have tended to focus on the protein component of bee-collected pollens as an index of nutritional quality.
However, the substantial nectar content of such samples (~ 50%
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dry mass) should not be ignored, especially in view of current
interest in assessing the nutritional quality of floral resources
for bees.
Early detection of the new potential invader; Epipremnum
aureum (L.) Engl.
S.N. Nzama, H.J.N. Sithole
Early Detection and Rapid Response Programme (EDRR –
funded by Working for Water) South African National Biodiversity Institute, P.O. Box 52099, Berea Road, Durban 4007,
South Africa
E. aureum (L.) Engl. (Silver vine) is a potential invader recently detected by the Early Detection and Rapid Response
(EDRR) programme in KwaZulu-Natal. It is an epiphytic
climber from Araceae family and is characterized by remarkable huge leathery leaves with yellow or white marks. This
plant is native to Southeast Asia and has spread to tropical
areas where it is highly invasive hence poses an invasion threat
to South Africa's subtropical coastal areas. E. aureum was introduced for ornamental purposes/as a garden plant where it
has escaped to the wild and now is realizing the potential of becoming invasive. Forest margins and disturbed sites are prone
to its invasion. In South Africa this species is not yet included
in the draft list of declared invaders. In preparation to get it
listed, a preliminary survey is conducted to map it in the wild
and assess its invasiveness. Biology studies are also done to determine its life/growth form. Nurseries within the South coast in
KwaZulu-Natal are surveyed to determine if horticultural trade
have a role to play in distributing E. aureum. The purpose of
this talk is to highlight our preliminary ecology results and present the nursery survey findings. This talk also serves to motivate for a need of long-term research on ecological studies
and control methods for rapid response.
A hypothetical Eucalyptus grandis defense model against
Leptocybe invasa based on transcriptome sequencing
C.N. Oates, A.A. Myburg, B. Slippers, S. Naidoo
Faculty of Natural and Agricultural Sciences, Department of
Genetics, Forestry and Agricultural Biotechnology Institute,
University of Pretoria, Pretoria 0002, South Africa
Eucalyptus species are widely used in commercial plantations
due to their superior growth, adaptability and wood properties. A
number of industries rely on these trees to supply the fiber, pulp
and sawn wood for their products. The Eucalyptus gall wasp,
L. invasa (Hymenoptera: Eulophidae), was first described in Israel in 2000 following the extensive damage it caused in plantation
nurseries. Adults oviposit in young tissue along the midribs, petioles and stems of numerous Eucalyptus species. The larvae are
endophytic herbivores whose feeding leads to the induction of
gall formation. Severely infested trees show a range of symptoms
including a gnarled appearance, stunted growth and death. Variations in resistance and susceptibility have been noted across different Eucalyptus genotypes. There is currently no information
available regarding the mechanism of defense in these plants.
The aim of this study is to investigate the defense response of a
resistant E. grandis clone against L. invasa. Year old E. grandis
seedlings were coppiced and maintained in a L. invasa-free environment until sufficient young material had been produced. Three
biological replicates of six plants each were naturally infested
over seven days. Thereafter, leaf midribs were excised and total
RNA was isolated from attacked and control plants for RNA sequencing. Initial analyses have identified 1381 significantly differentially expressed genes from the 44974 current E. grandis
gene models. Over representation data appears to support a defense model that includes a number of well described responses,
such as the oxidative burst and the jasmonate-mediated signaling
pathway. Some other defenses, which are less well characterized
in previous studies, include evidence for a gene-for-gene recognition system, the suppression of nutrient availability to the larvae
and the induction of secondary metabolism. This research represents the first step toward understanding Eucalyptus resistance
against this destructive plantation pest.
Anti-inflammatory, genotoxic and phytochemical properties
of selected South African medicinal plants used in treating
stomach-related ailments
A. Okem, J.F. Finnie, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
Ethyl acetate (EtOAc), ethanol (EtOH) 70% and water extracts of South African medicinal plants used in treating
stomach-related ailments were evaluated for their
cyclooxygenase-inhibitory activity against COX-1 and -2 isoenzymes. The standard plate incorporation assay for Ames
test was used to evaluate the genotoxic potential of the plant extracts. A spectrophotometric method was used to determine the
total phenolics, gallotannins, flavonoids and saponins in the
evaluated plants. All the EtOAc extracts exhibited percentage
inhibition in the range of 50.7 to 94.7% against COX-1 and
-2 isoenzymes at 250 μg/ml. All the evaluated plant extracts
were non-mutagenic toward S. typhimurium tester strains
TA98, TA100 and TA1537 without metabolic activation. Phytochemical analysis revealed relatively high amounts of total
phenolics, gallotannins and flavonoids in the evaluated plant
extracts. Total and steroidal saponins were detected in two
plant samples, Canthium spinosum and Cassinopsis ilicifolia
(bark). The general pharmacological activities exhibited by
some of the plant extracts in this study warrant their traditional
uses in treating stomach-related ailments. Further studies will
be aimed at isolation and identification of the bioactive compounds in the evaluated plant species.
SAAB Conference Abstracts
Antioxidant activity, total polyphenolic content and in vitro
inhibition of activity of digestive enzymes significant to diabetes
by leaf extracts of ten South African Ficus species
O.O. Olaokun a, L.J. McGaw a, J.N. Eloff a, V. Naidoo a,b
a
Phytomedicine Programme, Department of Paraclinical Sciences, University of Pretoria, Private Bag X04, Onderstepoort,
0110, South Africa
b
Biomedical Research Centre, Faculty of Veterinary Sciences,
University of Pretoria, Onderstepoort 0110, South Africa
Hyperglycemia is the hallmark of diabetes mellitus. Postprandial blood glucose levels may be high with normal fasting blood
glucose in early diabetes. Continuous elevated blood glucose deteriorates β-cell function by glucose toxicity, which provokes oxidative stress. One way to manage hyperglycemia is to inhibit the
activity of α-amylase and α-glucosidase, the enzymes which
break down carbohydrate. We investigated the potential of
crude acetone extracts of ten South African Ficus species to inhibit the digestive enzyme activities, and the possible relationship
between these activities, total polyphenolic content and antioxidant activity. A literature survey revealed that about 10 species
are presently reported to have anti-diabetes activity through
their glucose lowering activity in alloxan or streptozotocin induced diabetic laboratory animals. In no case were the mechanism(s) involved in the glucose lowering effects elucidated. All
the Ficus species we studied had varying polyphenolic contents
and antioxidant activity. The crude acetone extract of Ficus
lutea had the highest phenolic content (56.85 ± 1.82 mg GAE/g
of dry material) and the strongest antioxidant activity with a
TEAC value of 4.80 ± 0.90. Generally, no relationship was observed between the total polyphenolic content and the antioxidant
activity. The Ficus species weakly inhibited α-glucosidae activity
with Ficus sycomorus having the best EC50 (217 ± 69 μg/ml)
followed by F. lutea (289 ± 111 μg/ml), but strongly inhibited
α-amylase activity with F. lutea having the best EC50 (9± 2 μg/
ml) followed by Ficus craterostoma (11 ± 5 μg/ml). The results
of this study revealed that the crude acetone extract of F. lutea
is high in total polyphenolic content, antioxidant activity and is
a potent inhibitor of α-amylase activity. The polyphenolic compounds present in F. lutea may likely be responsible for the inhibitory activity against the carbohydrate hydrolyzing enzymes.
Further work is continuing on this species.
Potential of synthesized naphthoquinones for antituberculosis activity
C.B. Oosthuizen a, C. Hamilton b, N. Lall a
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
School of Pharmacy, Medicinal Chemistry, University of East
Anglia, Norwich NR4 7TJ, United Kingdom
Mycobacterium tuberculosis is one of the world's biggest
killers, with an incident rate of 9.4 million with a death of
205
1.7 million in 2009. Tuberculosis (TB) is also a major problem
in South Africa due to the high incidence of HIV/Aids patients.
Even though relatively adequate treatments are in place, the
emergence of multiple drug resistant (MDR) TB has become
a major threat, and thus calls for an urgent search for new and
effective treatments. Medicinal plants have been used traditionally to treat the symptoms of TB. Naphthoquinones have been
isolated from plant extracts and have shown activity against
Mycobacterium previously. Nineteen chemically synthesized
naphthoquinone derivatives were used to screen their activity
against M. smegmatis and M. tuberculosis, where five of
these compounds showed high activity with Minimum Inhibitory Concentrations (MIC's) ranging between 7.8 ug/ml to
200 ug/ml. These five compounds were tested for possible enzymatic mechanism of action utilizing glutathione disulfide reductase (Gtr – human analog) and mycothiol disulfide
reductase (Mtr – Mycobacterium analog) assays. None of the
samples showed inhibition of Mtr or Gtr but all five samples
showed some subversive substrate activity, with Km-values
ranging between 0.3 mg/ml to 2 mg/ml. The cytotoxicity of
the compounds was evaluated on Vero cells as well as on differentiated U937 macrophages.
The South African Biodiversity Information Facility: Data
mobilization in South Africa
F. Parker-Allie
Biodiversity Information Management Directorate, Kirstenbosch Research Centre, SANBI, Cape Town
South Africa is one of the world's most mega diverse countries, with a rich biological heritage but, direct and indirect
drivers of change, including habitat destruction and degradation, invasive alien species and climate change, threaten the existence of many species in the country. These changes and
threats highlight the urgent need to record, monitor and report
on biodiversity. The South African Biodiversity Information
Facility was initiated to address the country's need for an enabling platform for researchers, policy makers, conservation
scientists and practitioners to access, share and disseminate primary biodiversity data while at the same time having access to
global information. Currently SABIF serves over 14 million
biodiversity data records (including images), using the Darwin
Core Standard, with a network of more than 15 organizations
which contribute to the programme. Data sharing takes place
through both funded and non-funded mechanisms, thereby ensuring that resources are available to initiate digitization activities. A comprehensive policy framework has also been put in
place by SANBI, to enable data sharing which takes into account intellectual property rights, citations and sensitive data.
The next phase of SABIF looks at strengthening the biodiversity information “strategic partnership projects” with organizations in the country to ensure that data is relevant for both
science and policy uptake.
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SAAB Conference Abstracts
Evidence for a re-circumscription of the Thuidiaceae
(Bryophyta) in Africa and the East African Islands
N. Phephu a,b, A.R. Magee c,d, J. Van Rooy b, A.E. Van Wyk a,
D. Garcia-Avila e
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
South African National Biodiversity Institute, National Herbarium, Private Bag X101, Pretoria 0001, South Africa
c
South African National Biodiversity Institute, Compton Herbarium, Private Bag X7, Claremont 7735, Cape Town, South
Africa
d
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
e
Facultad de Biologia, Laboratorio de Botánica (Herbario),
Universidad Michoacana de San Nicolás de Hidalgo, Av,
Fco, J, Mújica s/n Col. Felicitas del Rio, C. P. 58030 Morelia,
Michoacán, Mexico
The moss family Thuidiaceae consists of about 19 genera
and more than 150 species worldwide. The group is characterized by attractive, regularly 2- or 3-pinnate branched stems;
uniseriate paraphyllia on stem and branch surfaces; dimorphic
stem and branch leaves, a single costa and ornate cells; perfect
peristome; asymmetrical capsule; occasionally papillose seta
and ciliate inner perchaetial leaf margins. Members of the family are morphologically very similar and exhibit tremendous infraspecific variability. As a result the delimitation of genera and
species has been problematic. In an attempt to resolve uncertainties in classification of the group and re-circumscribe the
African Thuidiaceae, morphological and anatomical characters
of selected Thuidiaceae were studied and reconstructed onto
the phylogenetic trees using parsimony. The relationship of
the African species of Haplocladium, Hylocomiopsis, Abietinella and Rauiella with other members of the Thuidiaceae is investigated. The exclusion of these genera from Thudiaceae has
been suggested by previous studies and a relationship rather
with Leskeaceae seems likely. Based on morphological and anatomical data we support their exclusion and recognize only
three genera and 16 species of Thudiaceae in Africa. Plant
size, stem branching pattern, paraphyllia morphology and ornamentation of leaf cells is shown to be taxonomically useful, particularly in combination at the generic level.
How healthy are our honeybees – Health check of a major
pollinator
C.W.W. Pirk, H. Human
Social Insect Research Group, Department of Zoology & Entomology, University of Pretoria, Pretoria 0002, South Africa
South Africa seems to escape the worldwide observed colony losses. Despite that all the major pests and diseases have
been reported for South Africa, the honeybee population
seems to be unaffected. Moreover, the outbreak in 2009 of
American Foulbrood (AFB) does not have the expected negative effect on the South African population. The vital natural
population with a high genetic diversity, thus buffering the negative effects of pests and diseases on the population, could play
a role or alternatively, there is a lack of data. We have started a
survey in order to fill this potential gap of knowledge and also
to evaluate the impact of common honeybee diseases in the
country. As expected all the major diseases are present, but it
also shows a fundamental lack of identifying skills by the beekeepers. However, local pests, e.g. Capensis, are catching the
attention of the industry. This suggests that the other pests
and diseases are below the economical threshold, resulting in
beekeepers ignoring them. If this conclusion holds, it also suggests that the natural population of African honeybees has traits
and features successfully dealing with the diseases compared to
its European counterparts. Therefore the African population is
the ideal model for investigating the underlying mechanisms
since and the overall population appears not to be diseased despite the presence of diseases.
The carbon content of Portulacaria afra (L.) Jacq
J.R. Pool a, B.S. Ripley a, M. Powell b
a
Department of Botany, Rhodes University, P.O. Box 94, Grahamstown 6140, South Africa
b
Department of Environmental Science, Rhodes University,
P.O. Box 94, Grahamstown 6140, South Africa
The demand for carbon credits, to offset carbon emissions,
has resulted in the evolution of the carbon market where rights
to carbon are bought as a method of offsetting carbon emissions. The Albany thicket biome of the Eastern Cape (South
Africa) has been degraded by anthropogenic activities and its
restoration has the potential to restore biodiversity, promote
ecosystem services, provide sustained employment, and generate carbon credits which will have the potential to create a
strong and lucrative South African based carbon economy. P.
afra, commonly known as Spekboom, is a succulent facultative
Crassulacean acid metabolism (CAM) plant from the family
Portulacaceae. It is an endemic to the semi-arid Subtropical
thicket. The exact carbon content of P. afra is yet to be scientifically verified. Because of its widespread adoption by restoration specialists and people with an interest in carbon credits
and the South African carbon economy it is important to identify the exact carbon content of P. afra as a percentage of total
biomass. Currently carbon stock calculations are based on the
estimate that 48% of P. afra dry biomass is elemental carbon.
Secondly, it is important to understand if and how carbon content varies with plant size. Allometric regression analyses found
plant volume (cm 3) to be the best predictor of total plant above
ground biomass. Exact carbon content (as a percentage of total
dry biomass) results have far reaching implications. The allometric regressions reported in this study could aid in future biomass and carbon studies in subtropical thickets and may have
SAAB Conference Abstracts
value in rangeland condition assessments. Priority areas, in
need of restoration, which will provide the most economic benefit (due to increased plant biomass accumulation) should be
identified and restored preferentially.
Long-term changes in the vegetation of Cape Point in
response to climate and fire
R.F. Powell a, M.T. Hoffman a, L. Gillson a, M. McGeoch b
a
Plant Conservation Unit, Botany Department, University of
Cape Town, Private Bag X3, Rondebosch, Cape Town 7701,
South Africa
b
Cape Research Centre, South African National Parks, Steenberg 7945, South Africa
Climate change is a known threat to biodiversity worldwide
and is predicted to have a major impact in the winter rainfall
zone (WRZ) of South Africa. Projections show that temperatures are expected to increase and rainfall to decrease in the
South Western Cape. The Cape of Good Hope Section of
Table Mountain National Park (CGH) lies within this crucial
area. This study investigates the drivers of change (climate,
fire and land use) and the subsequent response of key vegetative growth forms to these changes in the conservation area.
To understand past changes in CGH, climate data was analyzed
over a 100 year period and fire frequency was investigated
using Geographic Information Systems (GIS). Aerial photographs were compared and analyzed to get a further understanding of changes in land cover over a 63-year period. The
response of key growth forms to these drivers was studied
using repeat photography, with stratified points set out across
the reserve. It was found that climate has not changed significantly over the time period, although mean annual maximum
temperatures have increased (0.175 °C/decade). The frequency
of fire in the reserve has also not changed significantly over
the last 50 years. Comparison of the repeat photographs from
1966 showed that vegetation response varied across the reserve. In many cases there was very little difference in cover
and growth form composition while in others significant
changes in large proteoid shrubs (especially Protea lepidocarpodendron) were evident. Time since the last fire, alien plant
clearing and local disturbance effects (e.g. mole rat (Bathyergus suillus) activity) appear to have an important impact on
vegetation cover and composition. Although not evident over
the recording period, climate change impacts on fire regimes
and vegetation composition might be more evident over a longer time scale.
Allelopathic effects of Amaranthus
G. Prinsloo a , C.P. Du Plooy b
a
Department of Agriculture and Animal Health, University of
South Africa (UNISA), Florida Campus, Private Bag X6, Florida 1710, South Africa
207
b
Agricultural Research Council, Roodeplaat Vegetable and
Ornamental Plant Institute (VOPI), Private Bag X293, Pretoria
0001, South Africa
Amaranthus is highly valued by different communities in
South Africa and it is preferred for its flavor and palatability
by rural communities. It plays an important role in nutrition
among the leafy vegetables grown worldwide. As these crops
were growing as weeds, allelopathy has been known to exist
for centuries as a way of survival mechanisms by plants. In a
crop rotation or intercropping production system, Amaranthus
may pose serious problems for the follow-up crop. The project
consisted of three different trials to confirm and evaluate the extent of the allelopathic effects of Amaranthus on other crops.
Each trial investigated a different aspect of the mechanisms of
the possible allelopathic effect. A field trial, pot trial and seed
germination trial were conducted to determine the allelopathic
effects exhibited by Amaranthus. The field trial aimed at determining the effect of Amaranthus plants on four different vegetable crops namely spinach, tomato, cabbage and green
peppers. The pot trial aimed at determining the allelopathic effects of three different Amaranthus species on tomato seedlings
and the seed germination trial investigated the effects of a crude
extract of Amaranthus and the effect of extracts from different
plant organs on the seed germination of tomato, cabbage and
two weeds namely Conyza bonariensis and Campuloclinium
macrocephalum. All the extracts inhibited the seed germination
of C. bonariensis, tomatoes and cabbage seeds. A high electrical conductivity (EC) value of the extract was an indication of a
high concentration of ions which influenced seed germination
and probably the inhibition of growth that were observed in
the pot trials. The presence of a high concentration of oxalate
in Amaranthus contributes to the effects observed as it is generally responsible for root inhibition of seed germination and protection of plants when accumulated in plant organs.
An analysis of woody cover change in the mesic eastern
region of South Africa using repeat photography
J. Puttick a , M.T. Hoffman a, T. O'Connor b
a
Plant Conservation Unit, University of Cape Town, Rondebosch,
7701, South Africa
b
SAEON Grasslands-Wetlands-Forest Node, Ezemvelo KZN
Wildlife, P.O. Box 13053, Pietermaritzburg 3202, South Africa
Increases in woody cover in grasslands and savannas are a
phenomenon observed worldwide over the last century and
have social, economic, and conservation impacts due to associated losses in herbaceous productivity and biodiversity. Woody
thickening is well documented in South Africa although most
studies have been focused at local scales. We examined
woody cover change over the last century for the mesic eastern
region of South Africa using repeat photography. 200 Repeat
photographs were spread over an altitudinal gradient from the
coast to the Drakensberg, and a latitudinal gradient from the
208
SAAB Conference Abstracts
Tugela Valley in the north to the Border region in the south.
Woody cover change was quantified within landform units defined for each repeat photograph pair based on slope, aspect
and catenal position. Woody cover increased within 64% of
the landform units (n = 488), while 30% remained stable and
6% experienced a decrease in woody cover. Woody cover increases were greatest within the savanna, Albany thicket and
Indian Ocean coastal belt biomes but also occurred within the
grassland biome, particularly at the lower altitudes of the grassland range. Quantile regression of woody cover change versus
altitude revealed a ceiling on woody cover increase, which declined with increasing altitude. Although a maximum ceiling on
woody cover increase was apparent, observed woody cover
change was highly variable (r 2 = 0.07) along the altitudinal gradient. We propose that the ceiling on woody cover increase is
determined by global drivers such as climate and CO2 concentration while local land use drivers and abiotic factors such as
soils and landform type contribute to the observed variability
between sites.
Anti-microbial and anti-inflammatory activities of
Pleurostylia capensis Turcz. (Loes) [Celastraceae]
M. Razwinani a, S.C.K.M. Motaung a, T.E. Tshikalange b,
H.S. Abdillahi c, J. Van Staden c
a
Department of Biomedical Science, Tshwane University of
Technology, Private Bag X680, Pretoria 0001, South Africa
b
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
c
Research Centre for Plant Growth and Development, School
of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
P. capensis Turcz. (Loes.) is a large tree that is used in traditional African medicine as a treatment of various diseases including epilepsy, mental illness and in combination with other
plants for treatment of several ailments. It is also used to encourage sleep and bring good dreams. Extracts of three parts
(roots, leaves and bark) of P. capensis (Celestraceae) were investigated scientifically for antimicrobial and antiinflammatory activities. Water, ethanol and dichloromethane
(DCM) plant extracts were prepared and screened for antimicrobial activity using the micro dilution method against nine
microorganism, namely S. aureus, E. coli, Klebsiella pneumonia, Klebsiella oxytoca, Streptococcus pyogenes, B. cereus, P.
aeruginosa, S. typhimurium, M. smegmaris and C. albicans.
Minimum inhibition concentration (MIC) and minimum bacteria concentration (MBC) of water, ethanol and DCM extracts
were determined against these microorganisms. The antiinflammatory activity of water, ethanol and dichloromethane
extracts were evaluated against both cyclooxygenase enzymes
(COX-1 and COX-2). Out of three part plant extract, the roots
and bark exhibited the MIC values ranging from 25.0 mg/ml
to 1.563 mg/ml. The leaf extracts were not active especially
against Gram-negative bacteria. This may be due to more
chlorophyll being present. Gram-negative bacteria were found
to be more resistant than Gram-positive bacteria. For antiinflammatory activity the ethanol and DCM extracts were the
most potent. Ethanol (80%) barks and root extracts, gave the
highest inhibitory activity against both COX-1 and COX-2. Inhibitory activity for COX-1 is 98.0% and 98.1% respectively.
For COX-2, percentage inhibitions were 78.17% and 83.07%
respectively. Water extracts, which are the most used solvents
by traditional healers gave more than 50% inhibition against
both COX-1 and COX-2.
Photosynthetic and anatomical acclimation by the C3 and C4
subspecies of Alloteropsis semialata in low CO2 atmospheres
B.S. Ripley a, R. Strauss a, C.P. Osborne b
a
Botany Department, Rhodes University, P.O. Box 94,
Grahamstown 6140, South Africa
b
Department of Animal and Plant Sciences, University of
Sheffield, Sheffield S10 2TN, UK
The past 1–25 Myr have been characterized by sub-ambient
partial pressures of atmospheric CO2 (Ca) which impose a
greater limitation on C3 than C4 photosynthesis. In response
to low CO2 it was hypothesized that C3 plants alter leaf anatomy and photosynthetic responses more than C4 plants in order
to offset reductions in productivity. Here, we report the first
phylogenetically controlled comparison of the effects of subambient Ca on leaf anatomy and photosynthetic responses of
the C3 and C4 subspecies of A. semialata. Glacial CO2 concentrations resulted in marked alterations to C3 leaf anatomy that
were associated with increased mesophyll conductance and
even when combined with increased biochemical acclimation,
was insufficient to maintain photosynthetic rates. In contrast,
the C4 subspecies maintained photosynthetic rates and displayed less altered leaf anatomy. Our findings highlight the importance of biochemical and anatomical acclimations to
atmospheric CO2 and add to the understanding of how historically low CO2 gave C4 plants a photosynthetic advantage.
A molecular phylogeny of Encephalartos Lehm.
P. Rousseau a,b, P. Vorster c, D.P. Little d, M. Van der Bank a,b
a
African Center for DNA Barcoding, University of Johannesburg, Department of Botany and Biotechnology, P.O. Box
524, Auckland Park 2006, South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
Department Botany and Zoology, University of Stellenbosch,
Private Bag X1, Matieland 7502, South Africa
d
Lewis B. and Dorothy Cullman Program for Molecular Systematics, The New York Botanical Garden, Bronx, New York
10458-5126, USA
SAAB Conference Abstracts
Encephalartos is an African endemic cycad genus of 65 species and 2 subspecies and is the most endangered group of cycads with 80% considered threatened (CR, EN, or VU) by the
IUCN and all classed as CITES Appendix 1. Currently relationships within the genus, including species delimitation, are uncertain and in need of taxonomic investigation. Most studies
to date have used a combination of more traditional lines of evidence such as morphology, anatomy and geography. Also no
all-inclusive phylogenetic framework currently exists for Encephalartos. In the current study, DNA sequence from three plastid regions (rbcLa, psbA-trnH and matK) along with the nuclear
region ITS was used to produce a phylogeny using multiple accessions per species where possible. Results show an increase
in resolution at both the species and higher level and the delimitation of several new groupings. Each species grouping is characterized by shared derived morphological, ecological, and
geographic characters. This study provides the first step toward
a much-needed monograph of the entire genus.
DNA barcoding of Africa's endemic cycads: Encephalartos
Lehm. and Stangeria T. Moore
P. Rousseau a,b, P. Vorster c, D.P. Little d, M. Van der Bank a,b
a
African Center for DNA Barcoding, University of Johannesburg, Department of Botany and Biotechnology, P.O. Box
524, Auckland Park 2006, South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
Department Botany and Zoology, University of Stellenbosch,
Private Bag X1, Matieland 7502, South Africa
d
Lewis B. and Dorothy Cullman Program for Molecular Systematics, The New York Botanical Garden, Bronx, New York
10458-5126, USA
Africa's cycads (66 species and 2 subspecies in two endemic
genera: Encephalartos and Stangeria) are extremely endangered
with four species Extinct in the wild and 80% threatened (CR,
EN, or VU) with all included in CITES Appendix 1. Although
South Africa has some of the world's strictest cycad legislation,
cycads are still under threat from illegal collection for horticulture
and medicine especially where plants seized in an unidentifiable
condition. Currently developed legislation demands accurate identification for permit issuing. Ex situ conservation of genetic and locality based diversity is paramount. Furthermore, taxonomically
many species of unknown origin are difficult to identify especially
when diagnostic characters are absent. Species delimitation and
numbers are uncertain with field observations often contradicting
current understanding. DNA barcoding can assist in all the
above-mentioned scenarios and as such all proposed DNA barcoding regions (matK + rbcLa + psbA-trnH, nrITS) along with several additional regions were tested for all species encompassing
~350 samples. Results will focus on amplification success and
discriminatory power of the different markers.
209
The rust pathogen Puccinia psidii, an eminent threat to
South Africa
J. Roux, M.J. Wingfield
Department of Microbiology & Plant Pathology, Forestry and
Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
Fungal pathogens represent one of the greatest threats to the
survival of plants on earth, especially trees that live for long periods and adapt slowly. Several examples exist of the devastating impact that fungi have had on human existence via the
destruction and contamination of food crops. The fact that
trees suffer from diseases has only been recognized for about
130 years but there are many examples of fungal diseases
changing entire ecosystems. The rust fungus P. psidii was
first described in 1884 and has been described as the “biggest
threat to the ecosystem” in Australia. It has a host range of
more than 100 known hosts in the sub-family Myrtoideae.
Until the 1970s P. psidii was known only from South and Central America and the Carribean Islands, but it has subsequently
spread to the southern USA, Hawaii and Japan. Early in 2010
P. psidii was detected for the first time in Australia. In the
18 months since its first detection, it has spread throughout
NSW and into Queensland, affecting various native Australian
plants in the Myrtoideae. Current predictions, based on its impact on native Melaleuca species, are that it will eliminate several of these iconic tree species. The appearance of P. psidii in
Australia should be of great concern to South Africa. Tests on
South African Heteropyxis natalensis showed that this tree species is highly susceptible to this pathogen. South Africa has
several tree genera in the Myrtaceae and the local forestry industry relies on susceptible Eucalypt species. We are, therefore,
at risk of significant ecological and economic losses when this
pathogen enters the country, as it undoubtedly will. This is particularly due to the ready exchange of people and products between these two countries. Significant effort should be placed
on quarantine and breeding programmes to prepare for the appearance of P. psidii in South Africa and this should be done
sooner rather than later.
The ethnobotany, essential oil composition and antibacterial
activity of southern African Teucrium species (Lamiaceae)
A.K. Ruiters a, B.-E. Van Wyk a, S.F. Van Vuuren b,
P.M. Tilney a
a
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
b
Department of Pharmacy and Pharmacology, Faculty of
Health Sciences, University of the Witwatersrand, 7 York
Road, Parktown 2193, Johannesburg, South Africa
Three southern African endemic species of the genus Teucrium, Teucrium africanum, Teucrium kraussii and Teucrium
210
SAAB Conference Abstracts
trifidum of the family Lamiaceae are poorly studied with regard
to their anatomy, essential oil composition and the scientific
validation of their traditional medicinal uses as well as their taxonomic position in the genus. All three are used in traditional
medicine to treat digestive and respiratory ailments. A summary of the published ethnobotanical information is presented.
The essential oils were extracted from the three species, and
water, methanol and dichloromethane: methanol extracts of
the different plant parts made. These were used for the antimicrobial studies to determine the minimum inhibitory concentrations (MIC) against the bacteria, S. aureus, E. coli, B. cereus, K.
pneumoniae, P. aeruginosa, Moraxella catarrhalis and S. pyogenes. The composition of the oils was also investigated with
gas chromatography–mass spectroscopy (GC–MS). The essential oils of T. africanum and T. trifidum are very similar with αCubebene, β-Cubebene and β-Caryophyllene as main compounds. Antibacterial activity was recorded for T. africanum
against E. coli, with an MIC value of 0.125 mg/ml (dichloromethane: methanol extract) and against S. pyogenes, with an
MIC value of 0.16 mg/ml (essential oil). This data seems to at
least partially validate the traditional uses of Teucrium species
to treat digestive and respiratory ailments.
Isolation and characterization of compounds from
Calodendrum capense and Lydenburgia cassinoides with
antimicrobial potential against opportunistic pathogens
B.M. Sakong, A.S. Ahmed, L.J. McGaw, J.N. Eloff
Phytomedicine Programme, Department of Paraclinical Sciences, University of Pretoria, Private Bag X04, Onderstepoort
0110, Pretoria, South Africa
Infectious diseases are a serious concern worldwide especially in immune-compromised patients. The problem is compounded by the emergence of microbial resistant pathogens.
A wide range of microbes including bacteria, fungi, parasites,
viruses and protozoas are implicated as causative agents of various diseases. Two plant species (C. capense and L. cassinoides) used in South African traditional medicine for treating
infectious diseases were screened for antimicrobial activities
against C. albicans, C. neoformans, Aspergillus fumigatus,
E. coli, P. aeruginosa, S. aureus and E. faecalis. L. cassinoides
acetone extract generally had good activity, with MIC values
ranging from 0.04-0.15 mg/ml while C. capense MIC values
ranged from 0.31-0.62 mg/ml against the fungi. The two plant
extracts had good antibacterial activity against S. aureus and
P. aeruginosa, with MIC values ranging from 0.160.32 mg/ml. Antibacterial activity against E. coli and E. faecalis resulted in MIC = 0.63 mg/ml for both plants. Bioassayguided evaluation of the antimicrobial active components led
to the isolation and characterization of lupeol from C. capense
and ß-amyrin from L. cassinoides. The MIC of lupeol and
ß-amyrin ranged from 1.5-6.2 μg/ml against all the tested
organisms. Crude extracts and compounds were also tested
for cytotoxicity against Vero (monkey kidney) cells. Both
plant extracts had low toxicity with average IC50 values of
205.8 ± 8.38 μg/ml, for L. cassinoides crude extracts had
83.07 ± 44.66 μg/ml for C. capense crude extracts while IC50
values for the compounds were greater than 200 μg/ml, the
highest concentration tested. This gave an excellent selectivity
index of N 30 indicating the safety of the compounds. In conclusion both plant species showed broad antimicrobial activity
against the standard strains of bacterial and laboratory isolates
of fungal pathogens. The results validate the use of two plants
as anti-infectious agents in traditional medicine.
Immunomodulatory effect of Combretum molle leaves water
extracts on the production and expression of cytokines and
toll like receptors
A. Samie, T. Nefefe, T. Mulaudzi, P.O. Bessong
University of Venda, Department of Microbiology, Private Bag
X5050, Thohoyandou 0950, South Africa
Medicinal plants are known to have positive as well as negative effects on the immune system before and during infection.
In the present study, peripheral blood mononuclear cells
(PBMCs) were isolated from volunteers and maintained in culture in the presence of a stimulating agent (Phytohaemagglutinin: [PHA]) and the plant extracts. PBMCs isolated from HIV
negative and HIV positive patients were tested. The effect of
the plant extracts on the immune cells was assayed by measuring the production of interferon gamma in the cells supernatant
in the first protocol and the measurement of mRNA production
of several cytokines and Toll like receptors (TLRs) using a real
time PCR procedure. Measurements of the effect of the extracts
were conducted with and without activation by phytohemaglutinin. The measurement of INFγ in the cell supernatant indicated a slight increase in the production of the cytokine by cells
that were exposed to the plant extracts following stimulation
by PHA not before. There was a dose dependent variation of
the effect of the extracts on the cytokine expression. PBMCs
from HIV positive patients showed greater activation and
higher production of INFγ compared to HIV negative patients.
The mRNA expression of the cytokines and Toll like receptors
was evaluated by real time PCR and showed high expression of
IL6 by the cells. NFkappa B was also highly expressed by the
cells as well as TLR2. The present study showed that C. mole
has immunomodulatory capacities with special effect on improving the production of interferon gamma. The activation of
the cells and consequently the improved expression of certain
cytokines seem to use the NF kappa B pathway. Further studies
are needed to identify the chemical constituents responsible for
the observed effects.
Species used by Bapedi Traditional Healers for the treatment
of sexually transmitted diseases, Limpopo Province
S.S. Semenya a, M.J. Potgieter a, L.J.C. Erasmus b
SAAB Conference Abstracts
a
Departments of Biodiversity and bPhysiology and Environmental Health, School of Molecular and Life Sciences, University of Limpopo, Private Bag X1106, Sovenga 0727, South
Africa
Annually, millions of people are exposed to and affected by
a variety of curable sexually transmitted diseases (STDs).
These diseases can have a detrimental effect on the health status
of the individual. This study found that 47 plant species from
44 genera belonging to 31 families are used to treat STDs,
such as drop (gonorrhea), HIV/AIDS, khutlega, nta and tshofela (syphilis). Six of the 47 species are exotics, and were of
significant value to traditional healers. The majority (87.5%,
n = 41) of the species were used in the treatment of a single
STD; only 12.5% (n = 6) were used in the treatment of more
than one STD. Fifteen of the 47 species were used more than
once for the preparation of an extract. The remaining 32 species
all had a single application, thus was used to treat a single STD.
A number of species used in the treatment of STDs are protected by National and Provincial legislation. These include,
amongst others rare species such as Boscia albitrunca and
Eleaodendron transvaalense (used to manage HIV infections),
which are protected under the National Forest Act. Thirty five
(76%) of these species appear in the Red Data List. These include Dioscorea sylvatica (vulnerable), Drimia elata (insufficient data), Eucomis pallidiflora (near threatened), and H.
hemerocallidea (declining). These species, as noted by traditional healers are either declining or rare, and are increasingly
being cultivated in home gardens. The large number of species
employed in the treatment of STDs clearly reflects the diversity
of treatment protocols used by Bapedi traditional healers. In the
treatment of the more prominent STDs a number of alternative
species can be used, which in itself will ensure that treatment
options are always available.
In vitro germination of the threatened assegai tree, Curtisia
dentata
S. Shaik
School of Biological and Conservation Sciences, University of
KwaZulu-Natal, Westville Campus, Private Bag X54001,
Durban 4000, South Africa
C. dentata (Cornaceae) is a medicinally important indigenous tree native to southern Africa. In South Africa the stem
bark of this threatened species has been overharvested to treat
many medical conditions in humans and animals. As a result
of its threatened and protected status this study was performed
to investigate whether in vitro germination of C. dentata seeds
could be utilized as a possible mechanism to conserve the species. In the wild, propagation of C. dentata through seed may
be difficult and could take many weeks provided the climate
and rainfall are favorable. Seed yields can also fluctuate on a
year to year basis and current diminishing populations can exacerbate seed shortage. In addition, beetle predation of seeds
211
is a current and real problem. If seeds do survive to seedling
stage they become vulnerable to damage from drought, high
surface soil temperature, frost and damping off fungi. Therefore, the alternative cultivation and conservation techniques of
in vitro germination were considered. Experiments using physical, mechanical and chemical pre-sowing treatments were conducted in light and dark conditions to determine the
germination response of this species. Among the various treatments, the highest germination percentage was achieved in
seeds treated with concentrated H2SO4 for 10 min and incubated in the light. The quickest germination response was obtained
in mechanically scarified treatments on day 3 in both light and
dark conditions. The results indicate that C. dentata seeds possess exogenous dormancy due to the thick tough seed coat
which is the main inhibitor of germination.
Evaluation of antibacterial, antioxidant and mechanistic
activities of a plant from Myrtaceae family addressing
acne vulgaris
R. Sharma, A. Hussein, N. Lall
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
Fifty plant species grown in South Africa were selected for
their antibacterial activity. Ethanol extracts were prepared and
tested for their action on Propionibacterium acnes and the Minimum Inhibitory Concentration (MIC) were evaluated. The results using the broth dilution methods showed that many
crude extracts could inhibit the growth of P. acnes. The leaf extract of a plant from a family Myrtaceae exhibited best MIC
value of ≤ 62.5 μg/ml. The cytotoxicity effects of this extract
were determined by colorimetric XTT {2,3-bis (2-methoxy-4nitro-5-sulfophenyl)-5-[(phenylamino) carbonyl]-2H-tetrazolium hydroxide} assays on human macrophages U937 cells.
The extract showed low cytotoxicity exhibiting a 50% inhibitory concentration (IC50) of 400 μg/ml. Phytochemical test
revealed the presence of phenols, tannins, anthraquinones and
flavonoids in the ethanol extract. Bioassay-guided isolation of
ethanolic extract led to the isolation of two compounds. The
first compound (triterpene) did not show activity against
P. acnes at the highest concentration (500 μg/ml) tested; whereas the second (6-alkyl salicylic acid) compound exhibited MIC
of 0.25 μg/ml. The extract was further investigated for its inhibitory activity on glutathione disulfide reductase and mycothiol
disulfide reductase enzymes at concentrations ranging from
800 μg/ml to 1.56 μg/ml. The IC50 was found to be between
6.25 and 3.125 μg/ml for glutathione disulfide reductase and
36.77 μg/ml for mycothiol disulfide reductase. The antioxidant
activity was detected by DPPH (2,2-diphenyl-1-picrylhydrazyl)
radical scavenging capacity and EC50 (substrate concentration
to produce 50% reduction) was found to be 0.89 μg/ml. The
antibacterial activity of potent samples was further confirmed
by means of Transmission Electron Microscopy.
212
SAAB Conference Abstracts
Characterization of phenolic compounds in aqueous
extracts from seed coats of marama bean (Tylosema
esculentum)
J.S. Shelembe a, D. Cromarty b, M.J. Bester c, A. Minnaar a,
K.G. Duodu a
a
Department of Food Science, bDepartment of Pharmacology,
c
Department of Anatomy, University of Pretoria, Pretoria
0002, South Africa
The marama bean is an underutilized legume growing wild
in the arid and semi-arid regions of southern Africa. The seed
coats of marama beans contain antioxidant phenolic compounds with potential health benefits, but are not consumed.
Aqueous extracts for use as antioxidant functional food ingredient from seed coats of marama beans were prepared by extracting with water (water extract) or with water acidified to pH 2
(acidified water extract). The extracts were analyzed for phenolic content using spectrophotometric methods. Phenolic acids,
flavonoids and proanthocyanidins were analyzed by HPLCMS. Free radical scavenging activities of the extracts and
their protective effect against free radical induced human erythrocytes hemolysis, oxidative DNA damage and human LDL
oxidation were determined. Extraction of marama bean seed
coats under acidic conditions resulted in reduction in phenolic
compound content, antioxidant activity and lower protective effect against erythrocyte hemolysis with no significant differences in their protective effect against oxidative DNA damage
and LDL oxidation. Gallic acid and methyl (epi)afzelechin-3O-gallate were the major phenolic acid and flavonoid compounds respectively in the marama bean seed coat aqueous extracts. Proanthocyanidins were predominantly highly
galloylated prodelphinidins. The findings of this study show
that the extracts have a potential to reduce oxidative stress
which is implicated in many chronic diseases such as neurodegenerative diseases, cancer and cardiovascular disease.
Evaluation of the mutagenicity and stability of plant
extracts with potential use in the cosmetic field from
the Myrsinaceae family
S. Singh, N. Lall
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
The leaves and stems of a plant from the Myrsinaceae family, which is indigenous to southern Africa, have shown substantial anti-tyrosinase activity. The 10% propylene glycol
plant extract, as well as its formulation, was tested under different temperatures in order to determine their stability at Stability
Testing Services. The storage period extended over 3 months.
The pH, specific gravity, appearance, odor and viscosity were
tested at these intervals. Analysis of the results revealed that
the sample stored at 25 °C was most stable as it retained most
of the original activity. Approximately 90% of tyrosinase
inhibition was observed when the sample was tested at 1%.
The physio-chemical properties such as pH, refractive index,
relative density, appearance and odor were determined. In
order to determine the mutagenicity of the extract, samples of
the extract were tested on strains of Salmonella typhimurium
(S. typhimurium) in accordance with the Ames test. The number
of revertant colonies observed for the T98 and T100 strains at
the highest concentration (5 mg/ml) was 18.67 ± 1.15 and
103.33 ± 2.52 respectively. The number of revertant colonies
in the blank plates was observed to be 112.40 ± 3.65. According
to the Ames test, a sample must have more than twice the number of revertant colonies produced in the blank plates in order to
be mutagenic. The extract was classified as non-mutagenic
according to these tests. The irritancy and the skindepigmentation properties of the extract were tested at Future
Cosmetics. The irritancy potential of the extract was calculated
to be − 9.00% and overall the extract was observed to be a nonirritant by Future Cosmetics CC. This plant can be beneficial in
the treatment of hyper-pigmentation, a common skin disorder.
Dealing with newly detected invader: Sagittaria platyphylla
H.J.N. Sithole
Early Detection and Rapid Response Programme (EDRR –
funded by Working for Water) South African National Biodiversity Institute, P.O. Box 52099, Berea Road, Durban
4007, South Africa
The Early Detection and Rapid Response to emerging invasive alien plants programme (EDRR) aim to reduce the incidence of plant invasions through identifying them at an early
stage of invasion, plan rapid responses, explore and recommend effective control methods. S. platyphylla is one of the
newly detected invaders from Tropical America. It has severe
ecological impacts and poses a great threat to wetlands in
South Africa. The coastal areas are under a high threat because
the climatic conditions resemble that of the country of origin. S.
platyphylla is not yet declared as an invader in South African
legislative context therefore there are no recommended
methods to control it, but the process to get it declared has
been initiated. In the meantime EDRR has performed several
activities and explored possible control methods. Achieved
tasks are highlighted: species identity has been verified, awareness raising, mapping and herbicide field trials are in progress.
Thus the talk serves to encourage the like minded to support
EDRR Programme with sightings and provide inputs.
High throughput expression analysis of miRNAs and their
targets involved in the water deficit response in Vitis vinifera
M.C. Solofoharivelo a, A. Van der Walt b⁎, J. McBride b,
D. Stephan a, M.J Freeborough a, J.T. Burger a, S. Murray b
a
Vitis Lab, Department of Genetics, Stellenbosch University,
Private Bag XI, Matieland 7602, South Africa
SAAB Conference Abstracts
b
Centre for Proteomic and Genomic Research, P.O. Box 81,
Observatory 7935, Cape Town, South Africa
*Current address: Central Analytical Facility, Stellenbosch
University, Private Bag X1, Matieland 7602, South Africa
MicroRNAs (miRNAs) are small non-coding RNAs that
regulate diverse biological processes across various organisms.
In plants, miRNAs have been associated with plant development and in the response to biotic and abiotic stress. In this
study, we investigated the role of miRNAs in V. vinifera
(grapevine) under mild to severe water deficit. Grapevine is
one of the most important fruit crops in the world. Abiotic
stress caused by water deficit can severely limit plant development, growth and yield. Although grapevine has been described
as moderately tolerant to drought, recent evidence has shown
that gene expression is modulated by low to severe water deficit. Here, using miRNA microarray technology to analyze
miRNA expression during drought treatment of grapevine
plants, we identified several miRNAs that were differentially
expressed. Putative targets of these miRNAs were also identified using a whole genome Vitis microarray. Both miRNAs
and miRNA targets were validated by quantitative real-time
qPCR. Several of these miRNAs have been implicated in
drought responses in other plant species.
The chemical composition, antimicrobial and antioxidant
properties of the essential oils of Tulbaghia violacea and
Eucalyptus grandis
O.S. Soyingbe a, A.O. Oyedeji b, M. Singh c , A.R. Opoku a
a
Department of Biochemistry and Microbiology, University of
Zululand, Private Bag X1001, KwaDlangezwa 3886, South
Africa
b
Department of Chemistry, Walter Sisulu University, Private
Bag X1, Mthatha 5117, South Africa
c
Department of Biochemistry, University of Kwazulu-Natal
(Westville Campus), Durban 4000, South Africa
T. violacea (Harv.) L.f. and E. grandis W.Hill ex Maiden
are medicinal plants used by Zulu traditional healers to treat
respiratory track diseases. Essential oils hydrodistilled from
the rhizomes of T. violacea and the leaves of E. grandis
were evaluated for the chemical composition, antioxidant
and antibacterial activities. The GC and GC-MS analyses of
the oils revealed the main constituents of the essential oils
of T. violacea, to be 2,4-Dithiapentane (51.04%), p-Xylene
(20.59%), Chloromethylmethyl sulfide (8.69%), o-Xylene
(7.38%), Thiodiglycol (6.43%), and p-Xylol (5.88%). The
main constituents of the essential oils of E. grandis are mXylene (49.25%), Ethylbenzene (16.86%), Eucalyptol
(15.50%), o-Xylene (14.24%) and Limonene (5.14%).
While the oils of T. violacea showed weak antioxidant activity, the essential oils of E. grandis, exhibited a high DPPH
and ABTS scavenging activity. The antimicrobial activity of
the essential oils showed that the oils of T. violacea were
213
affective against 8 of the 16 microorganisms tested with
MIC values ranging from 2.5 μg/ml to 5.0 μg/ml; the oils of
E. grandis were active against 13 of the 16 organisms tested
with the MIC ranging from 0.625 μg/ml to 5.0 μg/ml, and the
MBC values ranging from 2.5 μg/ml to 10 μg/ml. The essential oils of E. grandis were also tested against 8 antibiotic resistant bacteria, and were seen to show activity against 7 of
the 8 with MIC ranging from 5 μg/ml to 10 μg/ml. The Oils
had low (1218 μg/ml, and 1641 μg/ml) cytotoxicity levels
against HEK293 and HepG2 cell lines respectively. It is apparent that the bioactivity of the essential oils of T. violacea
and E. grandis contribute to the use of these plants in folk
medicine.
A phytochemical and morphological comparison between
Pachystigma macrocalyx, Pachystigma pygmaeum and
Pachystigma thamnus
S.L. Stanton a, C.F. Van der Merwe b, A. Hussein a,
S.N. Venter c, T.A. Coutinho c , J.J.M. Meyer a
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Laboratory for Microscopy and Microanalysis, University of
Pretoria, Pretoria 0002, South Africa
c
Department of Microbiology and Plant Pathology, University
of Pretoria, Pretoria 0002, South Africa
★ Best oral presented by MSc student
The plants of the Rubiaceae family, specifically P. macrocalyx, P. pygmaeum and P. thamnus have been the focus of very
little research. P. pygmaeum and P. thamnus have been assumed to contain the polyamine pavettamine and thus cause
the disease “Gousiekte” in domestic ruminants; however extensive studies have not been done on P. macrocalyx. The aim of
this study was to compare these plants on morphological and
phytochemical aspects. The bacterial endophytes, which may
cause the toxicity, were compared using electron microscopy
and isolation techniques. The chemical compositions of the
three plants were analyzed using TLC, NMR and metabolomic
procedures. In the TLC analysis the standard, pavettamine was
spotted along with the crude extracts of the three plants; the
TLC plates were run on both polar and non-polar mobile phases
to reveal the compound composition. The compounds which
reacted with ninhydrin, possible polyamines, were noted and
also analyzed by NMR to determine their chemical structures.
Twenty samples of each species were used for the metabolomic
study to determine the differences between different collection
sites and the individual plants within the sites. These toxic compounds will be subjected to toxicity tests along with compounds isolated from the endophytes in future. Due to the
hypothesis that extracts from P. pygmaeum and P. thamnus
are responsible for the degradation of the ruminant's myofibers,
H9c2 cells which are derived from embryonic rat cardiac cells,
will be used to determine toxicity.
214
SAAB Conference Abstracts
Breeding systems in Protea
S-L. Steenhuisen, S.D. Johnson
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
It has been assumed that species of the large African genus
Protea have strong self-incompatibility systems. However,
this assumption was based largely on studies conducted on a
clade of bird-pollinated species that occur in the shrubby fynbos vegetation of the Cape region of southern Africa. To test
whether self-incompatibility occurs in a grassland/savanna Protea clade, which is largely insect-pollinated, we performed controlled pollination experiments on four species – Protea caffra,
Protea simplex, Protea dracomontana and Protea welwitschii.
Although pollen-ovule ratios of all four species fall within the
range for outcrossers, all four species are self-compatible and
capable of autogamous seed production. In P. caffra, a small
tree expected to carry substantial genetic load, selfed progeny
had rates of germination and early seedling survivorship
which were identical to those of crossed progeny. Selective exclusion experiments and allozyme analysis of eight polymorphic loci in progeny revealed that exclusion of vertebrate
visitors to P. caffra did not reduce outcrossing rates, and we
could infer that insects are effective agents of crosspollination in P. caffra. However, high inbreeding depression
(δ = 1) and a marked difference between maternal and progeny
Wright's fixation indices suggest that selfed progeny may not
reach reproductive maturity. The grassland Protea species studied are visited intensively by insects and are thus likely to be
facultatively autogamous with mixed mating systems. If one assumes previous reports of self-incompatibility in Protea to be
reliable, there have been at least five losses of SI and two
gains of autonomous self-pollination in this genus. However,
earlier studies in the genus were often methodologically flawed
and a thorough re-analysis of breeding systems in Protea is
required.
Woody cover change in the north-east arid savannas of
South Africa from 1940–present
N. Stevens a,c, B.F.N. Erasmus b, S. Archibald c, W.J. Bond a
a
Botany Department, University of Cape Town, Private Bag,
Rondebosch 7701, South Africa
b
School of Animal, Plant and Environmental Sciences,
University of the Witwatersrand, WITS 2050, South Africa
c
Natural Resources and the Environment, CSIR, P.O. Box 395,
Pretoria 0001, South Africa
Increasing tree cover in “open” systems is occurring globally. Tree cover increases in arid savanna regions of South Africa
have been noted to be extensive and widespread. Numerous
theories have been proposed as to what is determining increases
in these dry (b 450 mm) savannas. Local land-use management
actions or global drivers particularly elevated CO2 have been
considered to be the primary drivers, however some authors
suggest that the perceived changes are part of the inherent variability of the system. This debate remains unresolved as very
few multi-site, multi land-use, large-scale evaluations of
woody plant encroachment exist, with the majority of the studies documenting woody encroachment in an area less than
10 km 2. We measured the magnitude of woody cover change
in the north-east arid savannas of South Africa across a
160 km 2 area consisting of three distinctly different land-use
types; communal rangelands, commercial rangelands, conservation areas with elephants. Tree cover change was measured
between 1940 and 2009 using the aerial photo record. Detection
of woody cover from each aerial photograph was automated
using ECognitions' Object Based Image Analysis (OBIA).
Tree cover increased in commercial and communal areas and
decreased in conservation areas with elephants, however tree
cover changes were approximately 10% and therefore unlikely
to be a significant alteration to the landscape. The overall composition of the canopy structure however has shifted toward
smaller canopied plants. Our study indicates that overall land
cover has remained constant but there may be a shift in the
woody structure of these systems.
The effect of cold stress on infection of Cavendish bananas
with Fusarium oxysporum f. sp. cubense
R. Sutherland a, A.M. Viljoen b, A.A. Myburg c,
N. Van den Berg c
a
Department of Microbiology and Plant Pathology, Forestry
and Agricultural Biotechnology Institute (FABI), University of
Pretoria, Pretoria 0002, South Africa
b
Department of Plant Pathology, University of Stellenbosch,
Private Bag X1, Matieland 7600, South Africa
c
Department of Genetics, FABI, University of Pretoria,
Pretoria 0002, South Africa
The soil-borne fungus F. oxysporum f. sp. cubense (Foc)
causes Fusarium wilt of banana, one of the most destructive
plant diseases known. Some strains of the fungus, designated
Foc sub-tropical race 4 (STR4), cause disease to Cavendish bananas in cooler regions of the world, particularly after winter.
The aim of this study was to determine why Cavendish banana
plants become susceptible to Foc STR4 following predisposition by cold temperatures. Cavendish banana plantlets were
subjected to three different treatments: (a) inoculation with
Foc STR4 at 25 °C, (b) incubation at of 10 °C for 2 weeks followed by inoculation with Foc STR4 at 25 °C, and (c) inoculation with Foc STR4 at 10 °C. RNA was extracted from banana
roots at 3 and 12 h post inoculation and cDNA generated.
cDNA libraries were constructed and sequenced on a 454 GS
FLX pyrosequencer (15464 reads, 3.9 Mbp). An average of
417 contigs per library with an average contig length of
615 bp was obtained with 55.64% of the transcripts showed
similarity to the rice genome. The putative functions of transcripts were determined by homology searches on the National
SAAB Conference Abstracts
Center for Biotechnology Information (NCBI) database. Genes
identified include PR1, peroxidase, abscisic stress ripening protein and phenylalanine ammonia lyase. Gene expression analysis is currently underway to better understand the roles of these
in defense and cold stress at different time intervals. Preliminary results suggest down-regulation of defense genes during
cold stress. By reducing cold stress during the winter months,
or by uncoupling cold stress from down-regulation of defense
genes, Foc STR4 may be controlled in sub-tropical countries.
Fragrances and flavors of some South African plants
K.M. Swanepoel a, P. Soundy b, W.G. Alberts c
a
Southern African Essential Oil Producers Association
(SAEOPA), P.O. Box 462, Newlands, Pretoria 0049, South
Africa
b
Department of Soil Science, University of Pretoria, Pretoria
0002, South Africa
c
KARWIL Consultancy, Coral str 111, Lynnwood Glen, Pretoria 0082, South Africa
According to the fragrance and flavor industry, there is a
constant need for new flavors and aromas in the world. Latest
trends show an interest in South African plants with known
and unknown fragrances and flavors. Few indigenous plants
have been investigated for potential in the perfumery and flavoring industry. South Africa with its variety of flora, has untapped potential in the flavor and fragrance industries. Many
rural areas rich in bio diversity are also poverty stricken and
will need opportunities for development e.g. natural products
in the fragrance and flavor industries. Some of the aromatic
plants were identified with potential of commercial production
for the fragrance and flavor industry. The indigenous plants that
have been investigated for potential further production include:
Mondia whitei, Athrixia phylicoides, Warburgia salutaris,
Siphonochilus aethiophicus, O. lanceolata, Cymbopogon validus, Spirostachys africana, Tarchonanthus camphoratus, H.
odoratissimum, Acacia nilotica, Croton gratissimus, H. natalensis, L. javanica and Dovyalis caffra. Pelargonium spp.,
Agathosma spp. (Buchu) and S. birrea (Marula) and are already
well known for valuable and distinctive properties in the flavor
and fragrant applications. There are many more species in
South Africa that should be researched for the unique South African flavor and fragrance properties. Sensory evaluations were
done by the flavor and fragrance industry and chemical analysis
need to be completed, before the agricultural potential could be
investigated and explored for selection as future crops.
DNA fingerprinting of Acacia karroo: Attempting to resolve
taxonomic uncertainties and inform ecological observations
C.L. Taylor, N.P. Barker
Department of Botany, Rhodes University, P.O. Box 94,
Grahamstown 6140, South Africa
215
A. karroo Hayne is a very common woody species in South
Africa. The species displays a large amount of variation, especially in terms of its morphology with enormous variation in the
architecture of fully grown trees. Genetic variability of the species throughout South Africa was examined to test whether it is
correlated to the different morphotypes or ecotypes. The species is also currently encroaching in some areas of its distribution and it is hypothesized that one ecotype/genotype is
responsible for this encroachment. These findings could inform
management practices in the encroached areas. The study uses
Inter-Simple Sequence Repeat (ISSR) fingerprinting method
to investigate the genetic diversity in this species. Additionally
DNA extracts from fresh and silica dried samples of the same
plant were tested to determine whether the treatment of silica
drying compromises DNA extract and thus the quality of the
Inter-Simple Sequence Repeat Polymerase Chain Reaction.
The ISSR analysis found no specific genotypes within A. karroo. No difference was found in the quality of DNA extracted
from fresh compared to dried specimens.
Acacia saligna invasions: Genetics and species
distribution modeling
G.D. Thompson a , D.U. Bellstedt b, J.J. Le Roux a,
D.M. Richardson a, J.R. Wilson a,c
a
Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
b
Department of Biochemistry, Stellenbosch University, Matieland 7602, South Africa
c
South African National Biodiversity Institute, Kirstenbosch
National Botanical Gardens, Claremont 7735, South Africa
★ Best oral presented by PhD student
A. saligna, a species complex native to Western Australia, is
highly invasive in 20 countries on four continents. Using genetic analyses, we determined which lineages of the species complex (putative subspecies) are represented in the invasive range
in South Africa. In addition, we used species distribution
models to explore whether high genetic structure influenced native and introduced distribution patterns. From population genetic (microsatellites) and phylogenetic (nDNA and cpDNA)
analyses, we found deep phylogenetic divergences between
the native and introduced South African populations, such
that we were unable to associate South African entities with
any native subspecies of A. saligna. We then assessed distribution patterns by constructing correlative species distribution
models for the different subspecies of A. saligna. These models
accurately distinguished between the native subspecies niches,
but were unable to accurately predict introduced distributions
in South Africa and the Mediterranean Basin. Both the ecological and genetic findings suggest that a novel genetic entity of
A. saligna is present in South Africa. We speculate that this
novel entity may have arisen due to cultivation practices in
Western Australia, and that this was the entity that was introduced to South Africa. As a consequence, the invasive
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populations of A. saligna may have no historical analog in the
native range (genetically or in terms of a realized climatic
niche). This highlights the need to consider that native and invasive plant populations are distinct entities (genetically or in
terms of realized climatic niche) which is in contrast to current
assumptions that such populations are one and the same.
Do leaves play a more active role in the symbiotic relationship between domatia and mites?
P.M. Tilney a, A.E. Van Wyk b, C.F. Van der Merwe c
a
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 0006, South
Africa
b
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
c
Laboratory for Microscopy and Microanalysis, University of
Pretoria, Pretoria 0002, South Africa
Domatia are small structures on the lower surface of a leaf,
usually consisting of cavities or pouches covered by hairs or
leaf tissue, located in the axils between the midrib and secondary veins. They are found in many dicotyledons including certain members of the Rubiaceae. In the tribe Vanguerieae of this
family, they may or may not be present. As part of an ongoing
study of selected southern African members of the Vanguerieae, their structure in transverse section was investigated.
Light microscopic (LM) observations revealed the presence of
a number of “channels” extending from the outer periclinal
cell walls of the epidermal cells across the cuticle toward the
cavity of the domatia in some of the taxa. These structures in
Plectroniella armata were also examined using transmission
electron microscopy (TEM). Domatia are known to house
mainly mites, many of which are predatory or fungivorous, in
a symbiotic (mutualistic) relationship. To date, the role of
domatia is thought to be confined to the provision of shelter
for these organisms, their eggs and their young during development. However, the present study of the microscopic structure
of domatia revealed not only that the cuticle of the epidermis
of the domatia is thicker than in other parts of the leaf, but
also the presence of pronounced and closely-spaced cuticular
folds which are particularly conspicuous in domatia. What appear as transcuticular “channels” under LM turned out to be cuticular folds with electron dense inclusions under TEM. The
functional significance of the folds requires further investigation. In plants such folding of walls and membranes at ultrastructural level is usually functionally associated with an
increase in surface area to facilitate the active exchange of compounds/metabolites. This may indicate that translocation of
substances is possible from the domatium to the inhabitants
(or vice versa) and therefore suggests a far more active role
for the leaf in the symbiotic relationship than was previously
thought. More work is required to test such a possibility.
The CREW Programme: Making significant contributions
to taxonomy and conservation
M. Treurnicht, I. Ebrahim
South African National Biodiversity Institute, Kirstenbosch Research Centre, Private Bag X7, Claremont 7735, South Africa
The Custodians of Rare and Endangered Wildflowers
(CREW) is a programme that involves civil society in monitoring and conserving threatened plants. Our CREW volunteers
have been providing us with critical data required for updating
Red List Assessments, contributing to identifying conservation
priority areas, making significant new plant discoveries and submitting important distribution records and specimens to several
South African herbaria. The focus of this paper is to illustrate
the important contributions that citizen scientists make to Botany by showcasing their new discoveries, collaborative projects
with taxonomists and building on valuable herbarium collections. Since the inception of the CREW programme in 2003
we have discovered 15 new species, rediscovered 13 species
and collected population data on 825 species of conservation
concern.
Some Cape Erica species can self-pollinate: evidence for
autogamy and geitonogamy, with a facultative and
out-crossing seed-set advantage, in Erica chloroloma
(Ericaceae)
R.C. Turner a, J.J. Midgley b, S.D. Johnson a
a
School of Life Sciences, University of KwaZulu-Natal Pietermaritzburg, Private Bag X01, Scottsville 3209, South Africa
b
Department of Botany, University of Cape Town, Rondebosch
7701, South Africa
High levels of observed fruit-set in wild populations of E.
chloroloma, Cape St. Francis, South Africa, led us to hypothesize that, despite frequent visitation by Malachite Sunbirds
and Greater Double Collared Sunbirds, a certain amount of
self-fertilization was occurring. We employed breeding
experiments to determine the relative amounts of seed-set in
terms of autogamous, geitonogamous and allogamous pollination. Our results indicate highest seed set with outcrossing but
that autogamous and geitonogamous fertilization can contribute
significantly towards seed-set. Furthermore, facultative autogamy yielded higher seed-set than unmanipulated autogamy. We
also determined that insects, mostly Apis mellifera capensis
bees, were responsible for up to 20% of seed-set through selfing but not necessarily pollen transfer. Observed floral robbery
by Cape Weavers and White Eyes also contributes towards
seed-set through facultative disturbance of anther rings and
subsequent selfing. As a result of these factors, high fertilization levels are achieved and the species thus has a negligible
pollen limitation value of 0.005 by the Larsen-Barrett index.
Despite protogyny, the stigmas of individual flowers are receptive to their own pollen as soon as the stigma emerges from the
SAAB Conference Abstracts
corolla mouth. Our results showing that E. chloroloma has
hedged its reproductive bets through the ability to selfpollinate, and that it is thus likely, despite relatively large
sub-populations and abundant pollinators, that genetic diversity
within stands of the species is lower than in similar-sized populations of allogamous, bird-pollinated Cape Erica species.
Climate change-driven mortality of Euphorbia ingens in the
Limpopo Province: Causal abiotic and biotic factors
J.A. Van der Linde a, D.L. Six b, M.J. Wingfield a, J. Roux a
a
Department of Microbiology and Plant Pathology, DST/NRF
Centre of Excellence in Tree Health Biotechnology (CTHB),
Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria,
South Africa
b
College of Forestry and Conservation, Department of Ecosystem and Conservation Sciences, The University of Montana,
Missoula MT 59812, USA
The plant genus Euphorbia is one of the most diverse in the
world including more than 2100 species of both succulent and
woody plants. In South Africa, the largest of the succulent
tree-like euphorbias is E. ingens. In the last 10 to 15 years,
high levels of mortality of these trees have been observed in
the Limpopo Province of South Africa. The main symptoms include rotting and browning of the succulent branches, gray discoloration of the foliar parts, various spots and lesions on
succulent branches, blue stain of the main woody stems as
well as insect damage. In the past five years, a number of studies have been undertaken to investigate the possible causes of
disease and mortality in this tree, looking at both biotic (fungal
and insect) and abiotic (temperature, rainfall, evapotranspiration) factors. Diseased plant material and associated insects
were collected from four sites in the Limpopo Province.
Fungi were isolated from insect tunnels in the succulent
branches, blue stained wood as well as from insects collected
from diseased plant material. Insects included weevils (Scolytinae), bark beetles (Cossoninae) and a moth (Pyralidae). A wide
diversity of fungi were isolated belonging to the Botryosphaeriaceae, Cordycipitaceae, Microascales, Nectriaceae, Ophiostomataceae and the Teratosphaeriaceae. Analyses of weather
data revealed changes in annual temperature and precipitation
over the 40 year period analyzed, with greater upward trends
in temperature and downward trends in precipitation in the
Limpopo Province compared with the North West Province.
Estimates of potential evapotranspiration and water balance indicated an increasing water demand while precipitation has
remained the same or is decreasing. The dramatic death of E.
ingens observed, since about 2000, appears to be linked to increasing moisture deficits resulting in tree stress. This in turn
results in increased damage by opportunistic pathogens and insects ultimately contributing to tree mortality.
217
Pollinator ecotypes in the shrub Erica plukenetii
T. Van der Niet, R. Turner, J.J. Midgley
Botany Department, University of Cape Town, University
Private Bag, Rondebosch 7700, South Africa
Pollinator-driven speciation has been proposed as an important factor driving speciation in the mega-diverse Cape Floristic
Region. Most evidence in favor of this hypothesis put forward
to date has come from large geophytic irid and orchid lineages,
while data from proteoid and legume lineages seem to suggest
that pollinators were not important. Here we present a case of
pollinator ecotypes, arguably a key element in demonstrating
pollinator-driven speciation, for Erica, the largest genus of the
Cape flora. The widespread E. plukenetii is characterized by
great variation in vegetative and floral traits. The most common
form, with long-tubed red flowers, was visited by orangebreasted sunbirds that carried large amounts of Erica pollen at
the base of their beaks. Beak length closely matched the length
of the floral tube, and flowers were unscented, as is typical of
bird-pollinated flowers. Another form was characterized by
white, short-tubed flowers which emit a pleasant floral scent.
We speculate that this form is visited by nocturnal moths. The
two forms have been found to co-occur in nature, reinforcing
their status as genuine pollinator ecotypes. This is the first evidence for a role for pollinators in driving diversification in the
florally diverse heaths, which constitute almost 10% of the entire Cape flora, and it refutes the idea that this process is limited
to geophytic herbs only.
Biodiversity and restoration of Spekboom-dominated thicket
M.L. Van der Vyver a, R.M. Cowling a, A.J. Mills b,
M. Difford a, E.E. Campbell a
a
Restoration Research Group, Department of Botany, P.O. Box
77000, Nelson Mandela Metropolitan University, Port Elizabeth 6031, South Africa
b
Restoration Research Group, Department of Soil Science,
Stellenbosch University, Private Bag X1, Matieland 7602,
South Africa
An accepted criterion for measuring the success of ecosystem restoration is the return of biodiversity relative to intact reference ecosystems. The emerging global carbon economy has
made landscape-scale restoration of severely degraded P. afra
(Spekboom)-dominated subtropical thicket, by planting multiple rows of Spekboom truncheons, a viable land-use option. Although large amounts of carbon are sequestered when planting
a monoculture of Spekboom, it is unknown whether this is associated with the return of other thicket biodiversity components. We planted in degraded, intact and three differently
aged post-restoration (P. afra truncheons) sites nurserypropagated individuals of two woody canopy dominants
(Pappea capensis and Searsia longispina), and two intercanopy shrubs (Lycium ferocissimum and Rhigozum obovatum)
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SAAB Conference Abstracts
in September 2008 (spring). The experiment was repeated
again in May 2009 (autumn) and a succulent canopy species
(P. afra) was added. We assessed restoration success in terms
of the survival of planted individuals after 24 months (spring
planting) and 12 months (autumn planting). Contrary to expectations, survival was not related to a gradient of intactness
encompassing degraded, restoration and intact treatments that
are associated with increasing biomass and soil carbon. The
costs of incorporating the four woody canopy species into the
restoration programme's protocol were 2.4 times the costs of
restoring with P. afra alone. We also used carbon stock data
from restored and intact sites, and sampled carbon stocks at restored stands at a second site in the same thicket plant community. Similarly, we sampled plant community composition at
both sites. The total carbon stock of the oldest post-restoration
stand (250.8 ± 14 t C ha - 1) approximated that of intact stands
(245 t C ha - 1) and we observed a general increase in carbon
content with restoration age (71.4 ± 24 t C ha - 1 after 35 and
167.9 ± 20 t C ha - 1 after 50 years). A multiple correspondence
analysis separated degraded stands from stands under restoration based on ground cover, floristic composition and total
carbon stock. Older post-restoration and intact stands were
clustered according to woody canopy recruit abundance. Our
results suggest that Spekboom is an ecosystem engineer that
promotes the spontaneous return of canopy species and other
components of thicket biodiversity.
Identifying genomic regions involved in growth, wood
property, transcript and metabolite variation in an F2
pseudo-backcross pedigree of Eucalyptus grandis ×
Eucalyptus urophylla
M.M. Van Dyk a, A.R.K. Kullan a, E. Mizrachi a, C.A. Hefer a,
L. Jansen Van Rensburg a, D. Newman b, N. Coetzer c,
T.J. Tschaplinski d, K.C. Cushman d, N.E. Engle d,
G.A. Tuskan d, N. Jones e, A. Kanzler e, A. Bayley f, A.A. Myburg a
a
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria,
0002, South Africa
b
Department of Plant Science, University of Pretoria, Pretoria,
South Africa
c
Bioinformatics and Computational Biology Unit, Department
of Biochemistry, University of Pretoria, Pretoria, South Africa
d
Biosciences Division, Oak Ridge National Laboratory, Oak
Ridge TN 37831, USA
e
Sappi Forests Research, Shaw Research Centre, P.O. Box
473, Howick 3290, South Africa
f
Sappi Technology Centre, P.O. Box 6, The Innovation Hub,
Lynnwood, Pretoria 0087, South Africa
★ Best poster presented by Nanette Coetzer – shared with
Jonathan Botha
Breeding of Eucalyptus hybrids for clonal forestry in subtropical regions of South Africa is aimed at combining the
growth, form and rooting ability of E. grandis with the disease
tolerance of E. urophylla. The underlying genetic basis of the
observed hybrid superiority remains unclear. To identify genetic factors controlling growth and wood property traits in eucalypt hybrids, an F2 pseudo-backcross mapping family
(n = 314) derived from a cross between an F1 hybrid
(GUSAP1, E. grandis × E. urophylla, Sappi Forest Research)
and an E. urophylla parent (USAP1) was used for genetic linkage map construction, using microsatellite (SSR) and Diversity
Arrays Technology (DArT) markers. Phenotypic trait assessment for quantitative trait locus (QTL) analysis included physical measurements of tree diameter and wood density
performed on three-year-old individuals. Klason (acid-soluble
and -insoluble) lignin and cell wall sugar content were determined for a selection of 100 backcross progeny and used for
near-infrared analysis (NIRA) calibration. NIRA predictions
for glucose, xylose, arabinose, cellulose and total lignin content, as well as pulp yield were made for all individuals. Total
lignin and S:G ratios were also separately measured for all individuals. Immature xylem tissues, collected from 192 backcross
progeny, were used for metabolite profiling (ORNL, Oak
Ridge, TN) and Illumina mRNA-Seq (15 million PE50, BGI
Americas) quantification of transcript levels of more than
30,000 genes for which xylem expression was detected. To
bridge the gap between fine mapping and QTL validation studies, transcript and metabolite levels were treated as quantitative
traits and used for eQTL and mQTL mappings, respectively.
Co-localization of wood property, expression and metabolite
QTLs will facilitate the identification of positional candidate
genes and other components of regulatory networks underlying
phenotypic variation in this interspecific backcross pedigree.
Ensemble optimisation of cis-regulatory element discovery:
in planta benchmark and discovery in Eucalyptus
I. Van Jaarsveld a,b, E. Mizrachi b, F. Joubert a, Y. Van de Peer c,
A.A. Myburg b
a
Bioinformatics and Computational Biology Unit, Department
of Biochemistry, University of Pretoria, Pretoria 0002, South
Africa
b
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
c
Bioinformatics and Systems Biology, Plant Systems Biology
Department, University of Ghent, Ghent 9000, Belgium
Cis-regulatory motif discovery is extensively applied in the
in silico analysis of plant promoters. This is a pattern recognition endeavor which ascribes regulatory function to subtly conserved 5–20 nt words. Guiding this approach is the “guilt-byassociation” assumption that regions in the promoters of coexpressed or orthologous genes bind the same or similar transcription factors, and so regulate gene expression. Numerous
algorithms have been developed to detect regulatory motifs.
Their performance is generally poor with sensitivity b 0.223
and precision b 0.308 in yeast, Drosophila, mouse and human.
SAAB Conference Abstracts
Despite this performance, the necessity for annotating transcription factor binding sites in hierarchical regulatory pathways, ensures that it remains a widely used practice. Spatial
conservation of promoter motifs in plants is expected to be
less than that of metazoans, as large-scale genome rearrangements and transposable element activity have engendered a
loss of colinearity, expanded gene families, and resulted in
poor conservation in proximal non-coding DNA. Before
attempting cis-element discovery in E. grandis promoters, we
are comprehensively benchmarking existing motif discovery algorithms on plant-specific, simulated and generic promoters.
We aim to decipher the abilities and limitations of motif discovery tools in plants, and employ a synergistic ensemble implementation for secondary cell wall and cellulose biosynthesis
related promoters in E. grandis trees. This will ensure as accurate as possible detection of regulatory motifs which are associated with the economically important properties of secondary
cell walls in woody tissue, in this newly sequenced, fastgrowing and globally dominant plantation tree species.
Effects of smoke-water and smoke-derived stimulants
on rooting
J. Van Staden, M.G. Kulkarni
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
It is now well documented that smoke and smoke-derived
compounds stimulate germination and in the process significantly increase root growth. When considering the literature it
is clear that the effect on root growth per se has never been dissected properly. The main objective of this study was to test the
effect of smoke-water and smoke-isolated butenolide (3-methyl-2H-furo[2,3-c]pyran-2-one) on root system of a wide range
of plant species including agricultural and horticultural crops.
Findings of these studies have shown that smoke solutions
have an ability to stimulate rooting of a number of plant species. It is interesting to note that smoke solutions also showed
an improvement of rooting under temperature and water stress
conditions. The results of these studies are of considerable importance as root structure and developed forms the basis of successful plant establishment, nutrient mobilization and ultimate
plant survival and crop production.
Ethnobotany of the Cederberg
B.-E. Van Wyk
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, South Africa
The traditional uses of plants in the Cederberg region of the
Western Cape Province, South Africa, are poorly documented.
The Cederberg is well known as the source of commercial
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natural products such as rooibos tea (Aspalathus linearis) and
round leaf buchu (Agathosma betulina); some others are now
obsolete, including ceder wood (Widdringtonia cederbergensis) and tan bark from waboom (Protea nitida), suikerbos (Protea neriifolia), kliphout (Heeria argentea) and pruimbas
(Osyris compressa). This report forms part of an ongoing
study to document the useful plants of the Cederberg as a contribution toward a more complete understanding of the broader
patterns of traditional plant use in the Cape region. A checklist
of more than 106 ethnobotanically relevant plant species has
been compiled, including plants that are important as medicine
or for wound healing, food, beverages, timber, firewood and
several other everyday uses. Local inhabitants of the Cederberg
(in villages such as Wuppertal, Heuningvlei and Kleinvlei) still
regularly use indigenous plants. Until recently, these villages
were isolated from the main centers (with no easy access to
clinics and pharmacies) but an improved road system will undoubtedly result in the people becoming less dependent on indigenous plants so that the knowledge may gradually be lost.
There is a need for quantitative studies to allow for comparisons between different communities and also between different
generations.
Characterization of the cysteine protease and cysteine
protease inhibitor family in soybean nodules
S.G. Van Wyk a , K.J. Kunert a , B.J. Vorster b
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Department of Plant Production and Soil Science, University
of Pretoria, Pretoria 0002, South Africa
Soybean (Glycine max) is one of the most important sources
of vegetable protein for food and animal feed world-wide. The
symbiotic relationship between soybean and the Rhizobia, Bradyrhizobium japonicum, enables soybean to assimilate fixed nitrogen in the root nodules. This symbiotic association allows
soybean to be cultivated with reduced nitrogen supplementation, lowering production costs and maintaining high-protein
yield. However, the nodule life is limited and sensitive to environmental stress. The plant cysteine protease-cystatin system
plays an important role during plant development processes
and has been shown to be involved in nodule senescence. The
release of the complete genome data of soybean has allowed
all putative cysteine proteases and cystatin sequences to be
identified. However, it is not known whether all of these putative sequences are expressed, where and when they are
expressed, or which cysteine proteases and cystatins are involved in nodule development and senescence. In soybean,
only limited information is currently available about the expression of cysteine proteases with no cystatin expression data, despite soybean being one of the major crop plants in the world
and of significant importance to South Africa. The hypothesis
of this study is that there is a balanced interplay between individual cysteine proteases and cystatins during nodule
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SAAB Conference Abstracts
development, with changing expression profiles during nodule
development and during senescence. The overall aim of the
study will be to advance our knowledge regarding the cysteine
protease–cystatin system in soybean and to establish a relationship between individual cysteine protease and cystatin expression during nodulation. Further characterization of the
individual components of the protease–protease inhibitor system, might make it possible to silence a particular cysteine protease or recombinantly express a specific natural or engineered
cystatin in soybean nodules that could possibly delay either natural or stress-induced nodule senescence.
Effective invasive species management around protected
areas: Understanding the spatial dynamics of Lantana
camara invasions in South Africa's Kruger National Park
W. Vardien a, D.M. Richardson a , L.C. Foxcroft a,b,
J.R. Wilson a,c, J.J. Le Roux a
a
Centre for Invasion Biology, Department of Botany & Zoology, Stellenbosch University, Matieland 7602, South Africa
b
Conservation Services, South African National Parks,
Skukuza 1350, South Africa
c
South African National Biodiversity Institute, Kirstenbosch
National Botanical Gardens, Claremont 7735, South Africa
Invasive plants are one of the greatest threats to biodiversity
in Kruger National Park (KNP), South Africa's flagship protected area, primarily because of their impact on ecosystem services and functioning. The globally invasive and highly
variable species complex, L. camara, is particularly troublesome in this regard. L. camara reproduces sexually and vegetatively, and is associated with multiple dispersal vectors. Here
we use molecular techniques to explore how L. camara disperses in the KNP's Sabie-Sand River catchment, with the
aim of providing management-relevant insights. The history
of the species' presence in the park suggests either: a) downstream dispersal of seeds during normal flow and flood events,
and/or b) long distance dispersal by vertebrates and wind.
Using inter simple sequence repeat (ISSR) and amplified fragment length polymorphism (AFLP) molecular markers, we
assessed population genetic structure and used it as a proxy
for patterns of dispersal and to identify the main contributing
sources of propagules. Our results indicate that genetic variation is partitioned largely within populations as opposed to between them. Populations located at the confluence of the Sabie
and its main tributary, the Sand River, show the highest genetic
diversity. We also found that populations along the Sand River
contribute substantially more propagules to the lower reaches
of the Sabie than the upper Sabie itself. Spatial analysis
revealed a positive correlation between genetic and geographic
distance along the river. The most likely spread scenario for L.
camara in this area is continuous, from the Sand River subcatchment down into the lower Sabie River. However, only a
small part of the Sand River falls under KNP management.
We therefore recommend that control efforts should be focused
on the parks' neighboring areas as well, if the spread and reinfestation of L. camara is to be minimized.
Natural products in anti-obesity therapy – The good, the
bad and the ugly
I. Vermaak, A.M. Viljoen
Department of Pharmaceutical Sciences, Tshwane University
of Technology, Pretoria 0001, South Africa
Obesity is a major health concern of modern times and
should be considered a global epidemic. In 2005 it was estimated that 1.6 billion adults were overweight globally with at least
400 million classified as obese. Obesity is associated with and
can lead to many disease conditions including type-2 diabetes,
cardiovascular disease, hypertension, sleep apnea, and cerebrovascular accidents among many others. Conventional medicines used to treat obesity have high abuse potential and
frequently exhibit side effects. The commercial market for
anti-obesity preparations is enormous due to public awareness
of the ill-effects of obesity and the general perception that
being obese is less than attractive. This multibillion-dollar industry expands on a daily basis as new ‘miracle cure’ products
become available. The continued search for new therapies has
revealed multiple targets to combat obesity and highly complex
plant extracts are ideally suited to fulfill a multi-targeted approach. Many herbal formulations are currently commercially
available but most of them have been poorly researched in
terms of efficacy and safety, if at all. Not surprisingly, associations between consumption of botanical products and instances
of toxicity have been and are still being made. It is therefore imperative that these plants and derived herbal products be extensively investigated in terms of quality, efficacy, and especially
safety in order to validate their widespread consumption. The
phytochemistry, mechanism of action, in vivo efficacy or lack
thereof and toxicity will be discussed for several of the most
important plants to date used to treat obesity including: Camellia sinensis, Citrus aurantium, Ephedra sinica, Hoodia gordonii, Ilex paraguariensis and Panax ginseng.
The application of vibrational spectroscopy and
chemometrics in taxonomy
A.M. Viljoen, M. Sandasi, J.E. Maree, N.P. Mncwangi
Department of Pharmaceutical Sciences, Tshwane University
of Technology, Private Bag X680, Pretoria 0001, South Africa
Vibrational spectroscopy has been identified as an important
quality control technique in the pharmaceutical, food and beverages, agriculture and mining industries. The diverse applications include; the inspection and identification of raw
materials and quantification of active constituents or contaminants. The technique has gained popularity as it is nondestructive, inexpensive and requires minimal sample
SAAB Conference Abstracts
preparation. This work reports on the use of vibrational spectroscopy in the quality assessment of several commercially important South African species (Agathosma, Pelargonium,
Salvia, Eriocephalus, Harpagophytum). Chemometric processing of the spectral data using orthogonal projections to latent
structures (OPLS) discriminant analysis, partial least squares
(PLS) and multivariate calibration models has shown that vibrational spectroscopy is a powerful technique to distinguish
between closely related species.
Alternative indigenous Rutaceous hosts of ‘Candidatus
Liberibacter africanus’ and ‘Candidatus Liberibacter
africanus subsp. capensis’
R. Viljoen a,b, E.T. Steenkamp a,b , G. Pietersen a,b,c
a
Department of Microbiology and Plant Pathology, University
of Pretoria, Pretoria 0002, South Africa
b
Forest and Agricultural Biotechnology Institute, University of
Pretoria, Pretoria 0002, South Africa
c
Agricultural Research Council – Plant Protection Research
Institute, Pretoria 0002, South Africa
‘Candidatus Liberibacter africanus’ (Laf) is the causal agent
of citrus greening disease in South Africa. This bacterium is of
economical importance to the citrus industry as the disease it is
associated with results in a considerable reduction in yield. A
related bacterium, ‘Candidatus Liberibacter africanus subsp
capensis (Laf C), is commonly associated with an indigenous
member of the Rutaceae, C. capense. It has been postulated
that Laf C may represent an ancestral form of Laf. This study
aims to determine whether other alternative indigenous Rutaceous hosts exist that harbors either Laf or Laf C. 269 Vepris
lanceolata, 135 Zanthoxylum capense and 75 C. anisata trees
were sampled from across South Africa. These Rutaceous
members were selected as the psyllid vector of Laf, Triozaerytreae, is capable of completing its life cycle on these trees.
Total DNA was extracted from these samples which were
then subject to a generic Liberibacter species real-time PCR.
Samples with a Ct value of below 35 were considered positive.
A conventional PCR specific for Liberibacters were then performed on these samples and directly sequenced thereafter to
identify the Liberibacter species detected. Thus far LafC has
been identified from 11 V. lanceolata trees collected from
Knysna. Other samples are in the process of being screened.
This is the first report of LafC being present in an indigenous
Rutaceae other than C. capense. Laf has only been associated
with citrus trees from various African countries including
South Africa, Mauritius and Reunion Islands where citrus is
not indigenous. Thus the possibility exists that Laf originated
through a “host jump” from an indigenous bacterium onto citrus upon its introduction into the region. A thorough understanding into the host range of Laf will also aid in control of
citrus greening disease.
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Ug99 variants of Puccinia graminis f. sp. tritici in South Africa
B. Visser a , L.J. Szabo b, L. Herselman a, Z.A. Pretorius a
a
Department of Plant Sciences, University of the Free State,
Bloemfontein, South Africa
b
USDA-ARS Cereal Disease Laboratory, University of Minnesota, St. Paul, USA
The discovery of the Ug99 wheat stem rust race in Uganda
in 1999 heralded a new era for wheat rust research. Ug99 was
the first race to possess virulence for Sr31, a durable and widely
used stem rust resistance gene. Initial concerns about Ug99 in
terms of food security were not completely unfounded, since
not only has it spread to several African countries, Yemen
and Iran, but seven variants in the Ug99 race group have also
been described. Based on field tests in eastern Africa, 90% of
the world's wheat varieties are susceptible to Ug99 and its related races. Even though wheat cultivation in South Africa is
small compared to other countries, three of the seven Ug99 variants were originally identified in South Africa. Microsatellite
analysis of South African stem rust races divided the population
in two distinct groups. The first consisted of historically
detected races whereas the second grouping contained the
Ug99-related races, confirming the close relationship between
Ug99 and its South African variants. Two of these races most
probably represent exotic introductions into South Africa,
while the third seems to be a single step mutation. In 2010,
an eighth variant in the Ug99 lineage was identified in South
Africa, when race TTKSF acquired virulence for an unknown
resistance gene in a local cultivar. The application of new marker technology and implications of Ug99 diversity will be
discussed.
Plant cystatins and insect cysteine proteases: Weapons in a
molecular arms race
B.J. Vorster a, M-C. Goulet b, D. Michaud b
a
Department of Plant Production and Soil Science, University
of Pretoria, Pretoria 0002, South Africa
b
Département de Phytologie, Faculté des Sciences de l'Agriculture et de l'Alimentation, Université Laval, Québec (QC) G1V
0A6, Canada
On a molecular level the war between plants, and the insects
that eat them, is akin to an arms race, with each organism continually striving to out match the other. One of the weapons in
the arsenal of plants, targeted against the digestive proteases of
herbivorous Coleoptera, such as the Colorado potato beetle, is
cystatins or cysteine protease inhibitors. Cystatins are small
proteins that act as natural inhibitors of cysteine proteases,
thereby disrupting the digestion of plant material by insects
such as the Colorado potato beetle. However, the Colorado potato beetle is able to compensate towards the presence of dietary
protease inhibitors in plant tissues through a multi-component
defensive strategy involving the over-expression of inhibitor-
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SAAB Conference Abstracts
sensitive digestive proteases, the expression of proteases insensitive to the inhibitors as well as through proteolytic inactivation of the inhibitory proteins using non-target proteases.
More than 30 digestive cysteine proteases have been identified
so far in the potato beetle, in line with the observed ability of
this insect to elude the detrimental effects of cystatins induced
in wounded potato leaves. Our goal, in this study, was to determine whether functional diversity of the potato beetle digestive
cysteine protease complement was matched with similar functional variability of the potato host cystatin complement,
using the wound-inducible eight-domain potato multi-cystatin
(PMC), as a model. Computational modeling of the PMC domains interacting with cysteine proteases of the beetle suggested the onset of variable interaction strengths for the PMC
domains, then confirmed empirically with protease inhibitory
data showing complementary protease inhibitory spectra
among the eight domains. This data suggest, overall, that functional variability among PMC inhibitory domains has evolved
in response to predatory challenges by the Colorado beetle relying on cysteine proteases for potato leaf protein digestion.
Is frost a demographic bottleneck for savanna trees? Testing
the effect of freeze events on Colophospermum mopane
population structure in Limpopo Province, South Africa
M. Whitecross a , S. Archibald b, E.T.F. Witkowski a
a
School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Johannesburg 2050, South Africa
b
Natural Resources and the Environment, CSIR, P.O. Box 395,
Pretoria 0001, South Africa
★ Best oral paper presented by a young scientist
Frost disturbance is often mentioned in southern African savanna literature, but is seldom discussed in great detail. Nevertheless, it can represent an above-ground disturbance as
effective as fire depending on the resistance capacity of the
effected tree species. A severely freeze damaged stand of C.
mopane in the Venetia Limpopo Nature Reserve provided an
opportunity to investigate the mechanisms behind freeze damage impacts on C. mopane. Frost may therefore act as a possible
demographic limitation of C. mopane in preventing its southwards spread. Freeze damage of individual trees was assessed
according to tree height and landscape position – with lower elevations representing the most severe freeze zones and higher
elevations the least severe freeze zones. A high freeze severity
threshold (558.75 m.a.s.l.) and a low freeze severity threshold
(564 m.a.s.l) were found to distinguish between populations
of smaller, coppicing trees at lower elevations, and taller,
non-coppicing trees at higher elevations. Little freeze damage
was observed on tree canopies above 4 m in height. Trees
below 4 m that had experienced 100% freeze damage, failed
to regrow to their original heights from the previous season.
This is a possible driver of the pre-freeze height differences
seen across the slope; with low elevation trees having to recover from freeze events more frequently, and subsequent topkill
resulting in a decrease in height over time. Taller trees at higher
elevations experience less freeze damage and can grow beyond
the 4 m freeze zone which decreases their chance of severe topkill and stunted growth. Long term effects linked to heights and
densities suggested fewer, smaller trees at lower elevations due
to relatively higher freeze frequency impacts. It appears C.
mopane has limited resistance to freeze events, and this may
be linked to the absence of this species at colder latitudes in
the Southern Hemisphere.
Biological invasion assessment and eradication – A
national programme to reduce South Africa's invasion debt
J.R. Wilson a,b, P. Ivey a, I. Nänni a, P. Manyama a
a
South African National Biodiversity Institute, Kirstenbosch
Research Centre, Claremont 7735, South Africa
b
Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Private Bag X1, Matieland 7602,
South Africa
The number of biological invasions in South Africa is increasing as introduced species naturalize. Naturalized species
become invasive, and species which are invasive in small
areas become much more widespread. Therefore, even if there
are no new introductions, this country has a massive invasion
debt. However, to date, most management and research has focused either at the border or after species have become widespread. What has been missing are general post-border
assessments of the risks posed by introduced species, and the
consideration of eradication as a management goal where feasible. To address this, a national programme of Early Detection
and Rapid Response was initiated in 2008. In this talk we discuss the rationale for such an approach, how it was achieved,
and progress to date. We use Australian acacias as a casesystem to explore some of the main issues.
The transition of SANBI's herbaria from PRECIS to a
BRAHMS database management system
P.J.D. Winter
Biodiversity Information Management Directorate, Kirstenbosch Research Centre, SANBI, Cape Town
The PRECIS database was an international leader in its class
for several decades (1974-1990), but with the field of databases
moving more into the realm of PC's, Windows, Internet, and
general connectivity, it failed to progress much beyond a mainframe database model where users have only limited access to
the data holdings. Other databases were in a better position to
make use of technological advances, and have overtaken it.
Currently on an InterBase and Delphi platform, the expertise
of developing PRECIS to user's needs is no longer available
or cost-effective. There has been a steady increase in demand
among our users (for at least the last seven years) for the
SAAB Conference Abstracts
basic type of relational database functionality from PRECIS
that could no longer be supplied with the InterBase/Delphi system given the resources available for its operation and management. SANBI will provide a herbarium collection data service
that meets the current demand of users, and is built upon the
sound management, staffing and operation of a core
BRAHMS database. This will be the preferred national plant information system to support the capture and management of
fundamental taxonomic, specimen and floristic information
for SA. The project involves an integration of data from several
sources in SANBI. Some of this data will be centralized, while
others will be brought in as needed from external sources. The
benefits and risks associated with centralization are discussed.
The role of megaherbivores in shaping the structure of
subtropical plant communities
K. Yessoufou a,b, O. Maurin a,b, T.J. Davies c , M. Kuzmina d,
H. Schafer e, M. Van der Bank a,b, V. Savolainen f
a
African Center for DNA Barcoding, University of Johannesburg, Department of Botany and Biotechnology, P.O. Box
524, Auckland Park 2006, South Africa
b
Department of Botany and Plant Biotechnology, University of
Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa
c
McGill University, 1205 Avenue Docteur Penfiel, Montreal,
Quebec, Canada
d
Canadian Centre for DNA Barcoding, University of Guelph,
50 Stone Road East, Guelph, N1G 2 W1, Canada
e
Harvard University, 22 Divinity Avenue, Cambridge 02138,
USA
f
Imperial College London, Silwood Park Campus, Ascot SL5,
UK
The assembly of organisms into communities is influenced
by a variety of ecological and climatic factors, but evolutionary
relationships also play a key role in shaping the structure of
these assemblages. Examining phylogenetic trees of species
within communities provides a framework in which processes
such as competition or adaptation leave distinct signatures –
an approach that has been successfully applied to describe the
patterns of a few rainforests, microbial and animal communities. However, understanding the processes underlying phylogenetic community structure has been hampered by a lack of
long-term experiments to test complex biotic interactions. We
analyzed plant communities of the subtropical savanna–woodland biome of southern Africa, renowned for its large mammalian fauna. Reconstructing the phylogeny of species of trees and
shrubs based on DNA barcodes data and measuring multiple
defense strategies, we then compared the phylogenetic structure
of these communities under various pressures of herbivory, including ‘exclosures’ where megaherbivores have been denied
access for decades. We demonstrate that heavy pressure from
generalist megaherbivores shapes the structure of plant assemblages, favoring clusters of closely related species, while also
223
increasing functional diversity and providing a buffer to disturbances. Our results provide the first empirical test of theoretical
expectations for the effect of herbivory on community structure. These results help understand the evolution of savanna–
woodlands under drivers of change, while shedding new light
on how management of large game animals, such as elephants,
impacts biodiversity conservation in these habitats.
The molecular and metabolite profiling of grapevine berries
in a model vineyard where the microclimate of the
developing bunches has been altered
P. Young a,b, E. Alexandersson c, D. Jacobson a,b,
J. Lashbrooke a,b, Z. Coetzee b, A. Deloire b, M. Vivier a,b
a
Institute for Wine Biotechnology and bDepartment of Viticulture and Oenology, Stellenbosch University, Private Bag X1,
Matieland 7602, South Africa
c
Department of Plant Protection Biology, Swedish University
of Agricultural Sciences, SE-230 53 Alnarp, Sweden
An estimation of grape composition is considered to be essential in establishing grape quality. Grape composition is influenced
by a number of factors and can to a certain extent be manipulated
in the vineyard by viticultural management practices. This study
investigated the molecular response of V. vinifera cv. Sauvignon
blanc berries to treatments that led to an altered microclimate in
the bunch zone of a highly characterized vineyard setting (i.e. a
model vineyard). The carotenoid biosynthetic pathway was investigated due to its crucial role in photosynthesis (especially
photoprotection); as well as its role in the formation of the norisoprenoids: compounds formed by the degradation of carotenoids
and responsible for the characteristic flavor and aroma of certain
cultivars. Pathway analysis was used to analyze the expression of
the carotenoid biosynthetic genes at three time points during
berry development using grape whole genome arrays. The photosynthetic pigments were analyzed and the concentrations in the
berries correlated to gene expression. The altered microclimate
in the bunch zone resulted in significant changes in gene expression and carotenoid and chlorophyll concentrations. The expression of the genes involved in specifically the xanthophyll
cycles, as well as the photoprotective xanthophylls was differentially affected in the treated grapevines, relative to control plants.
This approach proved valuable to understand the molecular response of developing grape berries and the impact of changing
environmental conditions.
Pharmacological and phytochemical analysis of a medicinal
plant mixture that is used as traditional medicine in
Western Cape
S. Zonyane a, S.F. Van Vuuren b, N.P. Makunga a
a
Department of Botany and Zoology, Stellenbosch University,
Private Bag X1, Stellenbosch 7600, South Africa
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b
Department of Pharmacy and Pharmacology, Faculty of
Health Sciences, University of the Witwatersrand, 7 York
Road, Parktown 2193, South Africa
In traditional medicine, different plant species which are
often not related are combined as to enhance the efficacy of a
medicinal preparation. As part of indigenous herbal knowledge,
it is believed that better therapeutic effects are derived from
synergistic interactions between different plant constituents.
However, there are few studies which have confirmed this practice as it is mainly single plant extracts that are screened for bioactivity in South Africa. We thus investigated a plant mixture
which consisted of three plant species; Agathosma crenulata,
Dodonaea viscosa and Eucalyptus globulas for synergistic interactions. This plant combination was the most potent out of
eight plant mixtures which were screened for antibacterial activity, with MIC value of 0.049 against S. aureus and Bacillus
subtilis. Individual plant extracts were not as effective as the
whole plant combination. An in-depth investigation of phytosynergism in this plant combination using different combinations and ratios was conducted. Fractional inhibitory concentrations (FIC) for two-plant combinations revealed enhanced
activity when plants are combined (FIC values ranged from
0.079 to 0.750). The combination of D. viscosa and E. globulas
(0.079) exhibited the strongest synergistic interaction while the
combination of D. viscosa and A. crenulata was mildly synergistic for all test bacteria. Combining plants into a mixed herbal
preparation was beneficial for improving the action of plant
mixtures as individual plants were less active on their own.
Poster abstracts
Effects of long-term storage on antimicrobial and
cyclooxygenase-1 inhibitory activities of South African
medicinal plants
S.O. Amoo, A.O. Aremu, M. Moyo, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
The antimicrobial and cyclooxygenase-1 (COX-1) inhibitory
activities of 50% methanolic extracts obtained from ten different
medicinal plants stored for 16 years at room temperature were
compared to those of fresh plant materials collected from the
same locations. The plants evaluated are traditionally used for
treating pain and infection-related ailments and they included
Acokanthera oppositifolia, Artemisia afra, Buddleja salvifolia,
C. anisata, Dombeya rotundifolia, Ekebergia capensis, Ocotea
bullata, Protorhus longifolia, S. africana and Tetradenia riparia.
Lower minimum inhibitory concentrations (MICs) against S. aureus were observed in stored plant materials of all the species except A. afra and P. longifolia when compared to the respective
fresh materials. With the exception of D. rotundifolia and P.
longifolia, the MICs of the stored plant materials against both
C. albicans and P. aeruginosa were either lower than or the
same as those of fresh materials. The percentage COX-1 inhibition values of the stored plant materials were generally higher
than their respective fresh materials. Current findings indicate
that stored plant materials may retain their biological activities
over a period of time. Better activities observed in majority of
the stored plant materials are probably due to the production of
more potent metabolites arising from the breakdown of some
constituent chemicals.
Stimulatory role of karrikinolide (KAR1) and smokewater on photosynthetic pigment and phenolic contents
of micropropagated ‘Williams’ bananas
M.W. Bairu, A.O. Aremu, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
At low concentrations, smoke-water (SW) and smokederived karrikinolide (KAR1) are compounds with potential
cytokinin- and auxin-like activity. In comparison with metatopolin (mT), their role on the growth, photosynthetic pigment
and phenolic contents of micropropagated ‘Williams’ bananas
was investigated. Explants were cultured in modified Murashige and Skoog (MS) basal media supplemented with either
SW (1:125; 1:250; 1:500; 1:1000; 1:2000 dilutions) or KAR1
concentrations ranging from 3.3 × 10 - 12 to 1.2 × 10 - 24. After
42 days, growth parameters were measured while the photosynthetic pigments and phenolic contents were determined using
spectrophotometric methods. The photosynthetic pigments
chlorophyll a, b and total carotenoid contents were significantly
improved by KAR1 (4.8 × 10 - 22) and SM (1:125 and 1:1000).
These treatments were approximately two-fold and three-fold
better than the control and mT, respectively. Total phenolic
content was highest in KAR1 at 1.0 × 10 - 19 and 7.8 × 10 - 17 for
the leaves and roots, respectively. Furthermore, KAR1 at
1.0 × 10 - 19 had a significantly higher amount of total flavonoids
and proanthocyanidin in the root parts. At 1:500 dilutions SM
stimulated the highest amount of total flavonoids in the leaves
across the treatments. Since photosynthetic pigments and phenolic compounds play a significant role in the growth, defense
and survival strategy of plants, the findings of this study will
have practical significance for the acclimatization of micropropagated plants. The results are also demonstration of the potential of smoke as an eliciting agent.
Somatic embryogenesis and plant regeneration from leaf
explants of Merwilla plumbea (Lindl.) Speta
P. Baskaran, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Scottsville 3209, South Africa
SAAB Conference Abstracts
M. plumbea, a popular but threatened medicinal plant in
South Africa, was investigated for somatic embryogenesis by
cell suspensions and plant regeneration. Embryogenic callus
was initiated from in vitro grown M. plumbea leaf explants on
agar-solidified MS medium containing 8.3 μM picloram,
2.3 μM thidiazuron (TDZ) and 20 μM glutamine. Callus was
subsequently proliferated on solid medium containing 4.1 μM
picloram, 2.3 μM TDZ and 20 μM glutamine before transfer
to liquid MS medium supplemented with 0.4 μM picloram
and 0.9 μM TDZ for somatic embryo development. The highest
frequency of somatic embryogenesis (5.4-35.6, globular to cotyledonary somatic embryos/settled cell volume (SCV)) was induced on liquid medium containing 0.4 μM picloram and
0.9 μM TDZ and 150 mg l - 1 hemoglobin. The embryos were
regenerated (94.4%) into plantlets on solid media containing
1.4 μM gibberellic acid. The plantlets were grown further on
half-strength MS medium and successfully acclimatized. This
is the first report on induction of M. plumbea somatic embryogenesis. The protocol developed offers a viable means for mass
propagation and germplasm conservation, and it provides a system for physiological, biochemical, molecular and cellular
studies of embryo development.
Soil factors influencing the distribution of Portulacaria afra
in subtropical thicket
C.H. Becker a,b, C. Coetsee b, R.M. Cowling a
a
Department of Botany, Nelson Mandela Metropolitan University, P.O. Box 77000, Port Elizabeth 6031, South Africa
b
School of Natural Resource Management, Nelson Mandela
Metropolitan University, Private Bag X6531, George 6530,
South Africa
Subtropical thicket in South Africa has been heavily degraded and transformed to an open desert like state, with a major
loss of the succulent P. afra. Restoration of thicket can be
achieved by planting P. afra cuttings, and this study aims to investigate the relationship between selected soil properties and
P. afra, over a range of soil types and landscape positions, to
aid in the identification of the most appropriate restoration
sites. It investigates P. afra occurring in both natural stands
and in restoration sites; to determine factors that influence its
distribution. Observations and research show that P. afra dominates crests of hills and decreases with distance down slope;
that it prefers growing on north facing slopes and barely exists
on south facing slopes; that it's tolerant of a wide range of soil
conditions but thrives on rocky, dry soils and avoids soils that
may be seasonally waterlogged. It appears to survive better in
conglomerate soils than in alluvial soils and a possible clear indication is that sodium concentrations could be a controlling
factor. The data collection is split into three parts, whereby 1)
in experimental plots P. afra cuttings planted in different soil
types are subjected to different levels of salinity; 2) on a landscape level ten sites between Grahamstown and Calitzdorp are
analyzed to determine which factors (aspect, gradient, soil
225
depth, water infiltration and soil texture and sodium levels)
could be important in driving distribution; and 3) intensive
studies on north and south facing slopes at three of Working
for Water's restoration sites whereby soil is analyzed for
macro-nutrients, particle size, texture, and pH. This will combine with the survival rates of P. afra determine if its distribution is related to soil nutrients or physical properties of the soil
and if it's avoiding soils with higher concentrations of sodium.
Description of novel Burkholderia species associated with the
root nodules of indigenous Hypocalypteae and Podalyrieae
C.W. Beukes, L. Mthombeni, E. Van Zyl, S.N. Venter,
E.T. Steenkamp
Department of Microbiology and Plant Pathology, Forestry
and Agricultural Biotechnology Institute (FABI), University of
Pretoria, Pretoria 0002, South Africa
Most legumes can establish nitrogen-fixing symbioses with
root–nodule bacteria. This group of bacteria can represent either Alpha- or Betaproteobacteria. Although much is known regarding root–nodule bacteria of agriculturally important
legumes, the nitrogen-fixing symbionts of hosts indigenous to
South Africa remains to be characterized. The research in this
study focused on the rhizobial symbionts of the three indigenous Hypocalyptus species (subfamily Papilionoideae, tribe
Hypocalypteae) as well as those associated with species in the
genera Virgilia, Podalyria and Cyclopia (subfamily Papilionoideae, tribe Podalyrieae). A set of 69 rhizobial isolates were
obtained from these hosts and shown to be capable of
nodulating their original hosts, as well as the promiscuous
legumes siratro (Macroptilium atropurpureum) and cowpea
(V. unguiculata). To characterize and describe these bacteria,
we utilized a polyphasic approach in which both the phenotypic
and genotypic traits were studied. DNA sequence and phylogenetic analyses for four housekeeping genes (16S rRNA, recA,
rpoB and atpD) placed all of the isolates into the genus
Burkholderia. From these data we distinguished 25 distinct rhizobial lineages, which were also supported by a range of phenotypic characters (e.g., cultural growth properties and
metabolic abilities). However, the majority of these lineages
apparently lacked close relationships with known species of
Burkholderia. The uniqueness of the isolates examined in this
study was also reflected in the phylogenies for a nodulation
gene, nodA, and a gene involved in nitrogen-fixation, nifH.
The root–nodule bacteria examined in this study are thus unlike
other Burkholderia species, not only in terms of their housekeeping genes and functions, but also with respect to the information located on their symbiotic loci. Taken together, our
results suggest that the Burkholderia species associated with indigenous legumes have African origins and that both horizontal
and vertical gene transfers determine the evolution of their
symbiotic abilities.
226
SAAB Conference Abstracts
Sustaining Gnetum L. in Africa through improved
taxonomy and domestication
E.H. Biye, K. Balkwill, G.V. Cron
School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Private Bag 3, WITS 2050, Johannesburg, South Africa
The African species of Gnetum L. (Gnetales) are lianas in
the humid tropical forests of Central and West Africa. These
gymnosperms are nutritionally and economically valuable and
contribute greatly to poverty alleviation of the local people as
they are widely used as a vegetable (‘eru’). The African species
of this genus are however difficult to distinguish from one another, and are threatened due to over-exploitation and face the
risk of disappearing before they are sufficiently known. The
names Gnetum africanum Welw. and G. buchholzianum Engl.
have been interchangeably applied on specimens that apparently represent similar forms of Gnetum in Africa and this has
resulted in taxonomic confusion. This study aimed to clarify
the taxonomy of the African species of Gnetum and to promote
sustainable utilization and conservation of the species. An evaluation of variation in taste among Gnetum populations was performed to identify the best tasting species for cultivation.
Cluster analyses using morphological characters were carried
out to investigate the variation among the African populations
and to reveal additional characters to differentiate the species
for both male and female plants. Molecular markers (AFLPS)
were also used to clarify species boundaries. Reproductive
structures were found to be most useful in distinguishing species and the applications of the names G. africanum and G.
buchholzianum were clarified and two new African species
have been described: Gnetum interruptum E.H. Biye sp. nov.
and Gnetum latispicum E.H. Biye sp. nov. Taste analyses identified the leaves of G. buchholzianum and young leaves in general as best for an ‘eru’ (Gnetum) meal. This has implications
for cultivation and harvesting methods.
Promoter analysis of the Eucalyptus grandis secondary cell
wall related SND2 transcription factor gene
J. Botha a,b , D. Pinard a,b, N. Creux a,b, S. Hussey a,b,
C. Maritz-Olivier a, E. Mizrachi a,b, A.A. Myburg a,b
a
Department of Genetics, University of Pretoria, Pretoria
0002, South Africa
b
Forestry and Agricultural Biotechnology Institute (FABI),
University of Pretoria, Pretoria 0002, South Africa
★ Best poster presented by Jonathan Botha – shared with
Nanette Coetzer
NAC and MYB transcription factors (TFs) are important
components of the regulatory network controlling secondary
cell wall (SCW) biosynthesis in plants. Arabidopsis SND2,
SND3 and MYB103 are targets of the wood fiber SCW master
regulators NST1 and SND1, and are thought to play a role in
cellulose biosynthesis in fiber cell walls. Recent studies have
shown that although much of this regulatory network is conserved between herbaceous and woody model species, there
may be unique TFs or combinations of TFs that are important
for regulating xylem deposition in wood fibers. It is hypothesized that there is an analogous regulatory network in the commercially important tree genus Eucalyptus, which remains to be
characterized. In this study we aim to identify cis-regulatory sequences in the promoter regions of the E. grandis EgrSND2,
EgrSND3 and EgrMYB103 genes, to characterize the expression patterns of these promoters in Arabidopsis and to identify
specific TF-promoter interactions of EgrSND2 using a yeast-1hybrid (Y1-H) approach. Using the RSA tools suite (http://rsat.
ulb.ac.be), several previously described and novel cis-elements
were identified in all three Eucalyptus promoters. Promoter sequences (1.5 kb upstream of the translational start site) of the
three transcription factors were amplified and fused to the βglucuronidase (GUS) reporter gene for expression analysis in
transgenic Arabidopsis plants. All three promoters were able
to drive strong reporter gene expression, but not in a fiber-specific fashion as expected. This may be caused by a lack of a
fiber-specific element or combination of elements in the promoter sequence investigated, or may be due to a functional or
regulatory divergence of Eucalyptus and Arabidopsis promoters. Using a yeast one-hybrid analysis (Y1-H), we aim to
detect direct interaction of several upstream SCW associated
TFs with the promoter of EgrSND2 in order to characterize its
central role in the SCW transcriptional network.
Plant diversity of vegetation-over-ultramafic soil in Mount
Bulanjao, Palawan Island, Philippines
R.R. Castillo a, W.S.M. Gruèzo b
a
Center for Strategic Policy and Governance, Palawan State
University, Puerto Princesa City 5300, Palawan Island,
Philippines
b
Plant Biology Division, Institute of Biological Sciences, College of Arts & Sciences, University of the Philippines Los
Baños, College 4031, Laguna, Philippines
Mount Bulanjao is a low mountain (highest peak –
1036 masl) with extant natural vegetation-over-ultramafic soil
in the Municipalities of Bataraza and Rizal, Palawan Island,
Philippines. Results of the assessment and characterization of
plant diversity and vegetation types of this mountain showed
a relatively high diversity level of H′ = 4.17. A total of 193
plant species belonging to152 genera and 73 families were
recorded from the study area based from a total of 33
(10 × 10 m) sample plots. The dominant plant forms are trees
with 117 species followed by vines (30 species), herbs (25 species) and shrubs (21 species). In terms of importance value per
habit type, Alstonia macrophylla (Apocynaceae), Xanthostemon sp. (Myrtaceae), Dillenia monantha (Dilleniaceae) ranked
top for trees; Dracaena angustifolia (Agavaceae), Pandanus
luzoniensis (Pandanaceae), Melastoma sp. (Melastomataceae)
SAAB Conference Abstracts
for shrubs; Fimbristylis globulosa (Cyperaceae) Zingiber sp.
(Zingiberaceae), Imperata cylindrica (Poaceae) for herbs and
Dinochloa acutiflora (Poaceae), Calamus sp. (Arecaceae) and
Lygodium circinatum (Schizaeaceae) for climbers. Additional
noteworthy plants of these vegetation-over-ultramafic soil are
Brackenridgea palustris subsp. foxworthyi (Ochnaceae), Eurycoma longifolia (Simaroubaceae), Gymnostoma rumphiana
(Casuarinaceae), Jasminum aemulum (Oleaceae), Messersmidia argentea (Boraginaceae), Gymnostachyum pictum
(Acanthaceae), Wrightia hanleyi (Apocynaceae), Scaevola
micrantha (Goodeniaceae), Protium connarifolium (Burseraceae) and Phyllanthus balgoyii (Phyllanthaceae). The results
of the study showed that vegetation of Mt. Bulanjao is still intact, with types belonging to those of primary to secondary
forests-over-ultramafic soil to a large extent, with grassland
and brushland as well as riparian formation. All these vegetation types are still capable of providing excellent niches for
the wildlife fauna of this endangered mountain ecosystem.
Plant composition and diversity of forests-over-ultramafic
soil in Mt. Victoria Range, Palawan Island, Philippines
R.R. Castillo a, W.S.M. Gruèzo b
a
Center for Strategic Policy and Governance, Palawan State
University, Puerto Princesa City 5300, Palawan, Philippines
b
Plant Biology Division, Institute of Biological Sciences, College of Arts and Sciences, University of the Philippines Los
Baños, College 4031, Laguna, Philippines
Mount Victoria is a medium-sized mountain range (with
peaks ranging from 1500 to 1726 masl) straddling the Municipalities of Aborlan, Narra and Quezon, Palawan Island, Philippines. Generally, a greater portion of the mountain range
harbors the largest nickel deposit in Palawan Island. A mixed
broad leafed forest-over-ultramafic soil is present in this mountain range from sea level to 700 m elevation but with apparently
two altitudinal zones of plant diversity. At lower elevations
(0–300 masl) of this mountain, a forest zone is present which
is composed of 141 tree, 32 herb, 27 vine and 22 shrub species,
for a total of 222 species belonging to 174 genera and 75
families. The four most dominant species in this lower forest
zone are Xanthostemon speciosum, Tristaniopsis decorticata
(Myrtaceae); Casuarina equisetifolia (Casuarinaceae) and
Swintonia foxworthyi (Anacardiaceae). It had a relatively high
diversity level of H′ = 4.25. In the upper elevations (400 to
700 masl), a total of 81 species belonging to 67 genera and
46 families were recorded, composed of 50 tree, 13 vine, 11
shrub and 7 herb species. The dominant species in this
zone are C. equisetifolia (Casuarinaceae), T. decorticata
(Myrtaceae), Myristica guatteriaefolia (Myristicaceae) and
D. acutiflora (Poaceae). This upper forest zone had a diversity
index value of H′ = 3.76, which is slightly lower compared to
the lower forest zone.
227
Micro RNA expression in maize leaves and flowers
B.G. Crampton a, S.L. Murray b,c
a
Department of Plant Science, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0002,
South Africa
b
Centre for Proteomic and Genomic Research, P.O. Box 81,
Observatory, Cape Town 7945, South Africa
c
Department of Molecular and Cell Biology, University of
Cape Town, Rondebosch 7700, South Africa
Micro RNAs are approximately 20–22 nucleotides in length,
and act as master regulators of gene expression. Micro RNAs recognize complementary mRNAs and bind to them by base-pairing,
thereby regulating expression of the mRNA, either by blocking
translation or by cleavage and subsequent degradation of the
mRNA. In order to investigate the role of microRNAs in maize development, we employed Exiqon miRCURY LNA arrays (www.
exiqon.com) and profiled micro RNA expression in leaves and
male and female flowers. These arrays contain probes for micro
RNA genes listed in the database miRBase (www.miRBase.
org), and are representative of micro RNAs identified in all eukaryotic species. Comparison of micro RNA profiles of leaves
and male and female flowers indicated that nine micro RNA
genes were up-regulated in both male and female flowers relative
to leaves, whereas nine and 25 genes were up-regulated only in either in male or female flowers respectively. We obtained similar
results for down-regulated micro RNA genes. Of particular interest is the up-regulation of zma-MIR166, and members of the
zma-MIR171 family, both of which have previously been shown
to play a role in flower development. This study emphasizes the
utility of microarrays in rapid identification of micro RNAs and
in profiling micro RNA gene expression in plant tissues.
Emilia (Cass.) Cass. (Asteraceae, Senecioneae) in southern
Africa
G.V. Cron
School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Private Bag 3, WITS, Johannesburg
2050, South Africa
Emilia (Cass.) Cass. (Asteraceae, Senecioneae) is a tropical
herbaceous genus comprising about 100 species, most of
them African. The mostly glabrous herbs are annual or perennial with variable leaf forms. Similarly, the capitula may be solitary or few to several in lax corymbs, radiate or discoid, and the
florets range from white to pink, red, orange or rarely yellow.
Chromosome numbers also vary considerably within the
genus. Distinguishing features include the ecalyculate capitula,
elliptic-oblong cypselas with an obscure carpopodium and a
pappus of slender, persistent bristles. Twenty species of Emilia
occur south of the DRC and Tanzania, including seven from
southern Africa (Botswana, Namibia, South Africa and
Swaziland). Emilia hantamensis from near Nieuwoudtville
228
SAAB Conference Abstracts
was thought to be the first record of the genus from the winter
rainfall region of South Africa with a large disjunction between
it and either Emilia transvaalensis (northern KwaZulu-Natal
and Gauteng) or Emilia ambifaria (North West Province). It
has large, yellow radiate capitula - quite distinct from the
other discoid, purple or white-flowered Emilia species in
South Africa. This study aimed to investigate whether E. hantamensis was more closely related to the other radiate members of
the genus Emilia (the nearest being Emilia discifolia in Zimbabwe), or to the southern African discoid species. Phylogenies
based on nuclear markers have revealed that E. hantamensis
is not a member of Emilia at all, but a distinct genus closely related to Bolandia, Mesogramma and Stilpnogyne.
Socioeconomic gradients, garden design and plant diversity
patterns in urban areas in the North-West Province
and Gauteng
E. Davoren, S.S. Cilliers, S.J. Siebert
School of Environmental Sciences and Development, NorthWest University, Private Bag X6001, Potchefstroom 2520,
South Africa
In contrast to the main focus of studies in developed countries,
home garden research over the last three decades in developing
countries has been aimed primarily at either ethnobotanical documentation of the diversity and uses of garden species, or the promotion of home gardening for nutritional improvement of lowincome groups. Similarly in South Africa the majority of studies
have focused on the value of cultivated floras in home gardens
of rural areas for household consumption and poverty alleviation,
the cultivation of medicinal plants as a tool for biodiversity conservation and indigenous knowledge research. Between 2007 and
2010 several home garden projects have been and are still being
conducted by the Urban Ecology Research Group at the NorthWest University. The overall objective of these studies was to develop a better understanding of the plant diversity of home gardens, their contribution to urban plant diversity, as well as their
structure and function in a city, town, rural settlement and deeprural area. The current study aims to compare garden design
(traditional European approach versus a specific local ethnical approach, e.g. “tshimos”) and plant diversity with the mentioned
home garden studies along a socioeconomic gradient. Socioeconomic status is determined using variables such as monthly income, income generation, total number of residents per house,
modes of transport and schooling status. The degree of urbanization surrounding the home gardens is also important and was
quantified using fourteen demographic, physical and landscape
metrics measures. The completed and ongoing studies provide a
large dataset of home garden floras and the socioeconomic aspects
of the rural, peri-urban and urban environments. Results have indicated correlations between species diversity (total, native,
alien, medicinal, ornamental, vegetable, fruit trees), type of garden
design, socioeconomic status and degree of urbanization.
De novo assembly of the expressed gene catalogue of
Equisetum ramosissimum
A. Dos Santos a, E. Mizrachi b, C.A. Hefer a, A.A. Myburg b
a
Bioinformatics and Computational Biology Unit, Department of
Biochemistry, University of Pretoria, Pretoria 0002, South Africa
b
Department of Genetics, University of Pretoria, Pretoria
0002, South Africa
Horsetails (Equisetum spp.) represent some of the earliest
and most dominant vascular plants of the early carboniferous.
They diverged more than 360 mya from the rest of the ferns
and have remained relatively unchanged since. In addition to
their important phylogenetic position in the evolution of plant
vasculature, horsetails possess unique cell wall properties that
could provide insight into the evolution of cell walls in plants.
High-throughput transcriptome sequencing using Illumina
mRNA-Seq presents the opportunity to explore entire transcriptomes in a high-throughput and relatively low cost manner.
However, the de novo assembly of transcript-derived shortread data presents new challenges, including variable coverage
across assembled contigs, reads derived from alternatively
spliced transcripts, as well as sampling bias of highly expressed
genes. A gene catalog of E. ramosissimum was assembled from
~ 220 million, 80 bp paired-end Illumina high quality reads
(8.8 Gbp) generated from stem- and sporangiophore-derived
cDNA. The depth of sequencing and high quality of the reads
offered an opportunity to gain insight into the efficiency of
some of the available software for the complex task of assembling short-read data, while simultaneously providing a resource to answer further biological questions. Trans-ABySS,
Trinity, Oases and Velvet assemblers were compared using
standard sequence assembly metrics including N50, L50, median contig length, proportion of incorporated bases and total
number of assembled contigs. Assembled gene catalogs were
also evaluated according to annotation, such as predicted coding sequence and significant blast hits to other sequenced
plant transcriptomes. Oases was found to produce the highest
quality assembly in terms of contig contiguity and total amount
of unique transcriptome assembled when compared to the other
assemblers. The final assembly was annotated using BLAST2GO and InterProScan. The results include a comprehensive
expressed gene catalog of E. ramosissimum comprising of
26,318 non-redundant contigs with a median contig length of
1027 bp and total size of 34 Mbp, which could shed light on
many aspects of vascular plant evolution, as well as the unique
biology of horsetails.
Potential of two South African plants belonging to the
Greyiaceae family for the treatment of
skin hyper-pigmentation
M. De Canha, N. Lall
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
SAAB Conference Abstracts
Melanin biosynthesis is regulated by the tyrosinase enzyme,
which is responsible for the catalysis of the rate limiting step in
the melanin biosynthetic pathway. In humans, melanin biosynthesis takes place within the skin melanocyte cells. Ten percent
propane-1, 2-diol (PG) leaf extracts of two plants (S1 and S2)
belonging to the Greyiaceae family were screened for antityrosinase activity, mutagenicity, stability and irritancy. Ten
percent PG: deionized water extracts for S1 and S2 showed approximately 98% inhibition of the tyrosinase enzyme. Samples
were compared to that of known inhibitor Kojic Acid which
exhibited an IC50 of 2.841 μg/ml. Stability tests were performed at a corporate firm, Chemgrit Cosmetics, over a
3 month period and results recorded at 1, 2, 4, 8, and 12 week
intervals. Stability was compared to that of a control sample
and both S1 and S2 were found to be stable at room temperature. The samples also showed no mutagenic effects when S.
typhimurium strains TA98 and TA100 were used during the
bioassay. A clinical study done by private firm Future Cosmetics concluded that both S1 and S2 were non-irritants with
an irritant potential of -34.21% and - 37.90% for S1 and S2 respectively. S1 showed a large potential for the development of
a skin even toner when incorporated into a formulation. The
findings of the present study indicate that sample 1 has the potential to be used as effective and alternative treatments for the
skin hyper-pigmentation disorder.
The peatlands of the Highlands of Lesotho – A unique
aquatic system under threat
P.J. Du Preez a, L.R. Brown b, L. Seipethlo a
a
Department of Plant Sciences University of the Free State,
South Africa
b
Applied Behavioural Ecology & Ecosystem Research Unit,
University of South Africa, South Africa
Numerous hill-slope seeps and valley bottom peatlands
occur in the high-altitude headwaters of the Senqu River in
Lesotho. These peatlands deliver important ecosystem services such as water retention, purification, and slow release
of water as well as sustaining a unique plant and animal biodiversity. Due to the high altitudes (mostly above 2 000 m) a
slow process of peat formation is taking place. On these peatlands a very unique plant community exists which supports
several endemic plant species. A communal grazing system
exists in the highlands of Lesotho and these peatlands are
one of the main sources of pasture for the domestic stock. In
order to describe the vegetation and species composition of
these peatlands, sampling plots were randomly placed within
the peatlands. All species present were recorded and their
cover abundance assessed using the Braun–Blanquet cover
abundance scale. Environmental data included slope, aspect,
grazing, and erosion while the average height of the plants
was also estimated. The data analysis was done by using
TWINSPAN classification which was refined by using
Braun–Blanquet procedures. An ordination of the data was
229
also done by using the CANOCO ordination techniques.
The results reveal that the thurfur (elevated humps of peat)
on the peatland supports a different plant species composition.
Environmental factors such as wetland hydrology, drainage,
erosion, and biotic impacts play important roles in the distribution of the wetland associated species. Several impacts are
threatening to destroy these peatlands and drastic measures
to conserve these unique ecosystems need to be put in place.
Isolation and identification of compounds from an extract
of Strophanthus speciosus (N. B. Ward. & Harv.) Reber.,
with emphasis on cardiac glycosides
S. Emamzadeh-Yazdi a, A. Hussein b, G. Prinsloo c,
Q. Kritzinger a
a
Department of Plant Science, University of Pretoria, Pretoria
0002, South Africa
b
Department of Chemistry of Medicinal Plants. National Research Centre, Dokki, Cairo, Egypt
c
Department of Agriculture and Animal Health, University of
South Africa (UNISA), Florida Campus, Private Bag X6, Florida 1710, South Africa
The discovery of active compounds in medicinal plants plays
a strategic role in the phytochemical investigation of crude plant
extracts. According to literature, plants containing cardiac glycosides (CG) show potential for the discovery of more effective new
drugs in the treatment of viral infections. The aim of this study is
to investigate the antiviral, antibacterial and cytotoxic activities of
South African plants containing CG. Six plants were selected for
the study of which none of them exhibited anti-herpes simplex
virus activity, but only general toxicity. Chromatographic
methods were used to identify the compounds and determine
activity of the extracts on two bacteria, namely E. coli (Gramnegative) and E. faecalis (Gram-positive). The results showed
promising activity of S. speciosus fruit extract against Grampositive bacteria. Isolation and purification of the ethanol extract
of fresh fruit of S. speciosus was carried out by column chromatography and crystallization. Three compounds including a cardiac
glycoside were isolated from S. speciosus. Structural determination
of the pure compounds was based on physico-chemical properties
and various spectral data analysis such as NMR was done in order
to elucidate the structures of the compounds. The names of the
compounds are yet to be confirmed.
Optimizing germination of Coleonema album seeds
O.O. Fajinmi, M.G. Kulkarni, J.F. Finnie, J. Van Staden
Research Centre for Plant Growth and Development, School of
Life Sciences, University of KwaZulu-Natal Pietermaritzburg,
Private Bag X01, Scottsville 3209, South Africa
C. album is a decorative shrub with dainty, small white
flowers and a sweet, honey smell. It's an ideal garden plant
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and an interesting specimen for floral arrangements. Apart from
its horticultural value, a wide range of pharmacological
activities such as antithrombotic, antiplatelet, vasolidatory,
antibacterial, antifungal, antimycobacterial, antioxidant, antimicrobial, phytoalexin, and analgesic activities are attributed to
C. album. Aromatherapy properties of C. album includes: antiseptic, deodorant, insecticide, sedative, restorative, diuretic and
febrifuge activities. C. album is gaining popularity in South
African herbal medicine as a tincture, known as Immunat,
now marketed commercially. This has led to an increase in demand for C. album in the traditional medicinal markets. This
will cause a threat to the wild population as a result of its intensive collection. Increasing demand of a medicinal plant such as
C. album can only be met by developing effective propagation
protocols. Unfortunately, there is very limited information
available on the propagation requirements of this highly used
medicinal plant. This necessitates research into the seed germination requirements and general physiological growth requirement in vitro and ex situ as a crucial step to ensure its
survival. The influence of light, temperature, stratification
(cold and warm), smoke-water, KAR1 (Karrakinolide 1), plant
growth regulators (kinetin, GA3, KNO3, IAA, NAA and IBA)
on seed germination of C. album was investigated in this
study. Seeds incubated under cold temperatures of 10 °C and
15 °C showed favorable germination. No germination was
recorded at high temperatures (20, 25, 30 and 35 °C) even
after six weeks, unless they were transferred to cold conditions.
Seeds exposed to continuous dark conditions showed equal responses as seeds exposed to alternating light conditions. Seeds
with and without endosperm readily imbibed water which rules
out physical dormancy and indicates physiological dormancy.
Cold temperature conditions play a significant role in germination of C. album seeds.
The application of salicylic acid to induce tolerance against
C. austroafricana in E. grandis clone ZG14
L. Ferreira, S. Naidoo, A.A. Myburg
Department of Genetics, University of Pretoria, Forestry and
Agricultural Biotechnology Institute (FABI), Pretoria 0002,
South Africa
Eucalyptus is a globally important hardwood and fiber crop
that provides high quality raw material for industry. One of the
most important pathogens of this perennial is C. austroafricana, a fungus that is indigenous to South Africa and causes
stem canker. This plant–pathogen interaction is used to investigate the activation of defense signaling pathways and the systemic induction of defense mechanisms in Eucalyptus.
Salicylic acid regulates one such defense signaling pathway
resulting in broad spectrum long-lasting resistance throughout
the entire plant (systemic acquired resistance) that can be
detected through the enhanced expression of particular marker
genes such as pathogenesis-related protein 2 (EgPR2). The
aim of this study is to determine whether the exogenous
application of SA will lower the susceptibility of E. grandis
ZG14 clones to C. austroafricana infection. The experimental
procedure involved the treatment of the susceptible ZG14
clones with SA 24 h before inoculations. As controls, ZG14
clones treated with buffer and tolerant TAG5 clones were included in the experiment. In addition to measuring the lesion
lengths of the plants, stem tissue surrounding the inoculation
sites were harvested at three different time points. Following
RNA isolation and purification from the harvested samples,
gene expression profiling was conducted using reverse transcriptase quantitative PCR (RT-qPCR) to determine the quantitative expression of EgPR2. It is expected that a decrease in
lesion size and accumulation of EgPR2 transcripts, indicative
of the SA pathway and SAR, will be observed in the treated
ZG14 clones before and after infection with the pathogen.
This study will indicate whether the SA signaling pathway is
important for defense against C. austroafricana. It will also
qualify the use of SA to improve the tolerance of Eucalyptus
against this fungal pathogen.
The identification of desiccation-responsive heat-stable
proteins from the fronds of the desiccation tolerant form
of the resurrection fern Mohria caffrorum
A.T. Gill, J.M. Farrant, M.S. Rafudeen
Department of Molecular and Cell Biology, University of Cape
Town, Private Bag X3, Rondebosch 7701, South Africa
M. caffrorum (L.) Desv has the unusual characteristic in that
it has a seasonal desiccation tolerance (DT), being tolerant in
the dry and desiccation-sensitive (DS) in the rainy season. DT
fronds acquire protective mechanisms during drying that are
similar to those reported for resurrection angiosperms; however, there is limited information on mechanisms of vegetative
desiccation tolerance in ferns. Preliminary one dimensional sodium dodecyl sulphate – polyacrylamide gel electrophoresis (1D SDS PAGE) showed that the DT form produced several new
heat-stable proteins, which were not present in the DS form
upon dehydration. The current study was undertaken to further
characterize the heat-stable proteome of this species by use of
2-DGE in order to identify proteins that might play a protective
role against dehydration. Three proteins were detected only in
the dehydrated samples and these proteins were referred to as
‘de novo’ proteins. All three of these protein spots were identified by LC-MS/MS with high significance to known proteins.
Two of the protein spots that were detected as ‘de novo’ were
identified by LC-MS/MS as the chloroplast enzyme RuBisCo
(ribulose-1,5-bisphosphate carboxylase/oxygenase) and the
third ‘de novo’ protein was identified as an Oxidoreductase.
Additionally, five protein spots that were up-regulated (paired
t-test, P b 0.05) during drying were identified by LC-MS/MS.
Only two of the five proteins were matched to known proteins.
The two up-regulated proteins were identified as the antioxidant enzyme, superoxide dismutase (SOD) and the molecular
chaperone, heat shock protein 70 (HSP70). The functional
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physiological and biochemical roles of these proteins as protectants in desiccation tolerance are being investigated.
Identification of transposable elements in the pitch canker
fungus, Fusarium circinatum
J. Grové a, M.P.A. Coetzee b, E.T. Steenkamp a
a
Departments of Microbiology and Plant Pathology;
b
Genetics, Forestry and Agricultural Biotechnology Institute
(FABI), University of Pretoria, South Africa
F. circinatum is an economically important ascomycete that
causes pitch canker disease of pine trees. Transposable elements
(TEs) have been identified in some Fusarium species where
they may comprise a significant portion of the genomic content.
The aim of this study was to identify TEs in F. circinatum
using the available genome sequence and to evaluate their potential contribution to inter- and intra-specific diversity in Fusarium.
The de novo repeat-finding program, RepeatScout, was used together with BLAST to identify a set of 93 repetitive sequences
in F. circinatum. Of these, eight were selected for further analyses
as they displayed similarity to known TEs or the characteristic
structural features associated with these elements. Six of the repetitive sequences represent retrotransposons and two nonautonomous DNA transposons. By making use of similarity
searches with known proteins encoded by TEs, a further 58 contig regions with enzyme homology were identified in the F. circinatum genome, although only two harbored open reading frames
that were not interrupted by nonsense and frame-shift substitutions. Overall it thus seems that the putative TEs in F. circinatum
are fragmented and non-functional, which suggests that these elements are in the degradation phase of their lifecycle within the
genome. Additionally, at least one of the eight putative TEs in
F. circinatum appeared to be present in high copy numbers in
the closely related Fusarium verticillioides and Fusarium fujikuroi, but not in the more distantly related members of this
genus. PCR-based assays indicated that one of the putative
DNA transposons varied considerably in distribution and density
among different isolates of each of F. circinatum and F. verticillioides. These data thus suggests that TEs represent a significant
source of intra- and well as inter-specific variability and holds potential for use in epidemiological studies of F. circinatum and its
close relatives.
Invasive Crotalaria agatiflora Schweinf. – Ecology and
distribution in South Africa
T.P. Jaca
Early Detection and Rapid Response Programme (EDRR),
South African National Biodiversity Institute, Private Bag
X101, Pretoria 0001, South Africa
C. agatiflora (canary bird bush) is an evergreen shrub or small
tree up to 1-10 m tall; mostly glabrous, with young shoots softly
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hairy. The leaves are grayish-green, 3-foliolate; leaflets on a short
stalk (petiole), petiole mostly longer than leaflets, glabrous to
densely hairy. Flowers are lemon-yellow or greenish-yellow,
with a projecting greenish or purple beak in many-flowered racemes to 400 mm long. Canary bird bush is native to Tropical
East Africa and North-East Africa (Tanzania and Kenya) and
was probably introduced in South Africa as an ornamental. The
earliest record of this species in South Africa is of a specimen
in the Pretoria National Herbarium collected in Johannesburg
area at the Railway Horticulture Garden in 1921 and the earliest
record of its establishment in the wild is from Rustenburg to
Brits. The species is a proposed category 1a in NEMBA regulation. Although no studies have focused on its effects on natural
ecosystems canary bird bush may affect the ecology of invaded
areas in several ways, for example the enhancement of nitrogen
levels in the soil. It threatens watercourses in grassland and savanna biomes; potentially invasive on forest margins and also occupying cleared grassy areas. The distribution of canary bird bush
in South Africa was mapped using records from South African
Plant Invaders Atlas database, herbarium records and field records. Results indicated that canary bird bush distribution is
mostly along road sides and the species has spread into natural areas for example, Colbyn wetland, Wonderboom Nature
Reserve and Faerie Glen Nature Reserve.
A guide to plant families of southern Africa
M. Koekemoer a , H.M. Steyn a, S.P. Bester a,b
a
National Herbarium, South African National Biodiversity
Institute, Private Bag X101, Pretoria 0001, South Africa
b
School of Environmental Sciences and Development, NorthWest University, Private Bag X6001, Potchefstroom 2520,
South Africa
Knowledge of plant families allows one to place unknown
plants into broad categories. Once the familial identity is established one can focus on the smaller divisions of genera and
eventually species. Southern Africa has a total of 225 plant
families. A project to illustrate the diagnostic characteristics
of the 51 largest families is currently underway – these families
represent ± 90% of the total flowering plants for this area. The
publication will assist scholars, students, amateurs and professionals to identify these plant families. The aim is to educate
the public on the beauty and diversity of our fascinating flora
and to expand the base of knowledge of the plant families. If
a person can attach a name to a plant, it immediately has
more meaning and scientific value, fostering appreciation. It
is then easier to communicate about the plant and to find
more related information on it. The information presented is uncomplicated and designed for users at different levels of expertise. The focus will be on having more images than text. This
product will make the complex process of classification and
identification more ‘friendly’ and understandable to scientists
and non-scientists alike.
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Be warned! Invasive succulent, Furcraea foetida (Mauritius
hemp) on the loose!
R. Lalla
Early Detection and Rapid Response Programme (EDRR),
South African National Biodiversity Institute (SANBI), Private
Bag X101, Pretoria 0001, South Africa
F. foetida (= Furcraea gigantea) is a succulent, with swordshaped, light green leaves arranged in a basal rosette. Belonging to the Agavaceae family, this species was widely cultivated
for fiber in the past. However, in more recent years F. foetida
has been labeled as a “garden escapee” in some countries, as
its invasive potential is being recognized. F. foetida thrives in
cliff-like habitats, and is tolerant of very shallow soil. This species reproduces prolifically, with approximately 1250 bulbils
(vegetative reproductive structures) produced per flowering
stalk. Carpets of offspring which result from the mass production of bulbils, transforms into impenetrable thickets over
time. F. foetida poses a threat to indigenous vegetation, and
its invasive potential must be investigated. In 2009, F. foetida
was proposed to the EDRR programme as an EMERGING Invasive Alien Plant (IAP) in KZN, and at the time, not much was
known about the distribution of this species in the country. Efforts of the EDRR programme have led to a significant increase in
the number of known F. foetida localities in KZN, and in other
provinces in South Africa. This poster highlights the biology
and ecology of F. foetida, identifying features of the species,
and current known South African localities, as well as challenges
that have been experienced in dealing with this species.
Single nucleotide polymorphism (SNP) diversity in xylem
and leaf expressed cellulose synthase genes of Eucalyptus
grandis
B. Lombard a , C. Hefer a,b, A. Van der Merwe a, E. Mizrachi a,
A. A. Myburg a
a
Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
b
Bioinformatics and Computational Biology Unit, Department of
Biochemistry, University of Pretoria, Pretoria 0002, South Africa
E. grandis is a commercially important tree species with excellent wood properties for pulp and paper production. Recent
availability of the E. grandis genome sequence provides possibilities for tree improvement by means of marker-assisted
breeding. Genetic variant discovery is important for identifying
links between genotypic and phenotypic variations in tree
populations. This study focused on single nucleotide polymorphism (SNP) diversity in xylem and leaf expressed cellulose
synthase (CesA) genes of E. grandis. Illumina mRNA-seq
reads from immature xylem and young leaf tissues were generated from 30 E. grandis individuals representing 28 families in
a breeding population. The RNA sequences were aligned to the
E. grandis reference genome using TopHat software and visualized using SAMtools. Data for eleven characterized Eucalyptus CesA genes was extracted and analyzed to determine the
distribution of SNPs in primary and secondary cell wall related
CesA genes. Coverage up to 4160 × as well as minor allele frequency (MAF) up to 0.29 were detected for the CesA genes.
SNPs were only called with a minimum SNP quality of 60,
minimum coverage of 8 × at the SNP position and minor allele
coverage of 4 ×. Synonymous or non-synonymous amino acid
changes associated with coding SNPs were recorded. An interesting finding is that it appears that there is far greater diversity
of alleles expressed in primary cell wall related genes than secondary cell wall related genes of the same thirty individuals. It
was also found that SNP density in primary and secondary cell
wall related CesA genes ranged from 0.6 to 13.3 and 1.2 to 10.3
SNPs per 100 bp. Methods from this study will be applied to
the rest of the transcriptome sequence to describe genetic diversity in protein coding genes of this breeding population, as well
as for the development of SNP markers for future molecular
breeding efforts.
South Africa's succulents under threat
L.E. Makwarela, J.E. Victor
National Herbarium, South African National Biodiversity Institute, Private Bag X101, Pretoria 0001, South Africa
The Red List of South Africa is a useful tool for assessing
conservation priorities, and furthermore, provides insight into
areas where information is lacking and future research thrusts
are needed. Succulents are prone to threats from overharvesting, and also have an unusually high number of species classified as Data Deficient due to the lack of information. Our
analyses show that in South Africa, the Asphodelaceae are the
most threatened of the succulent plant families and are therefore
most in need of conservation attention. Mesembryanthemaceae
have the highest proportion of (and highest number of) Data
Deficient species and are therefore most in need of future research efforts. It is concluded that succulents are particularly
vulnerable to threats because of their relatively slow growth
compared with other herbaceous plants, coupled with their desirability in the horticultural industry.
Variations in the epidermal structure of Acacia tortilis
Hayne. grown in different climatic conditions
P.S. Mashile, R.B. Bhat, M.P. Tshisikhawe
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
Leaf epidermal structure of A. tortilis from nine different sites
was investigated. The leaves of A. tortilis were found to be hypostomatic. The epidermal cell showed a polygonal structure with
anticlinal walls either straight or curved. Trichomes were non-
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glandular, unicellular and conical in shape. Paracytic, anisocytic
and stoma with a single subsidiary cell were the stomatal types
observed. The frequency of epidermal cells was higher as compared to that of guard cells. The stomatal index and frequency
of stomata and epidermal cells were also compared and recorded.
Variations in the epidermal structure of leaves and morphological
structure of the plant from different habitats were also recorded.
Further anatomical investigations are in progress.
Ecological, morphological and ethnobotanical assessment
of Acacia karroo and Acacia tortilis at Nylsvley Nature
Reserve, Limpopo Province, South Africa
P. Masiagwala, R.B. Bhat, M.H. Ligavha-Mbelengwa
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
The genus Acacia is the most significant species of the family Fabaceae. This family was first described by Linnaeus in
1773. A. karroo also known as the sweet thorn, is a species of
Acacia, native to southern Africa from southern Angola east
to Mozambique, and south to South Africa. This species is
widespread in clayey water-logged areas of the Nylsvley Nature Reserve. It is a pioneer species and generally invades disturbed habitats. It grows in a range of soils from sandy to
heavy clayey ones. In Nylsvley Nature Reserve it occurs in a
few numbers in sandy soils and is common in fertile clayey waterlogged areas. A. karroo is often associated with symbiotic
Rhizobium sp. that fixes nitrogen. It is therefore important in
the nutrient dynamics of the nature reserve. This plant is of economic importance as fodder for the animals and it has a number
of medicinal and other commercial values. A. tortilis is drought
resistant, can tolerate strong salinity and seasonal waterlogging
and generally forms open forests in pure stands or mixed stands
in these dry lands. It is also adapted to an environment with little and unreliable rainfall, and under these constraints it is as
well adapted to anthropogenic pressures as it is the sole source
of animal fodder, firewood and shelter for nomads. Combined
pressures and their variation are reflected in its growth forms.
The aim of the project was to investigate the ecological, morphological and ethnobotanical assessment of A. karroo and A.
tortilis at Nysvley Nature Reserve, Limpopo province. Data
were collected from different habitats of the Nysvley Nature
Reserve such as water logged, sandy and loamy soil areas. Canopy diameter was measured by using the measuring tape, tree
height was taken using the height rod, and the trunk diameter
by using diameter tape. Morphological variations have been observed within species growing under different habitats. Further
ecological and ethnobotanical investigations are in progress.
Medicinal plants of the Blouberg Mountain, Limpopo
Province, South Africa
K.M. Mathibela, B.A. Egan, H.J. Du Plessis, M.J. Potgieter
233
University of Limpopo, Department of Biodiversity, Private
Bag X1106, Sovenga 0727, South Africa
Blouberg Mountain, Limpopo, is a center of plant endemism
upon which a large rural community depends for numerous natural resources. The mountain itself enjoys no formal protection
(Blouberg and Maleboch Reserves protect only a small area on
the northern slopes) and few studies have examined the extent
to which it provides such services. This study investigates the
medicinal plant species used by traditional healers on the
mountain in terms of species collected, manner of harvesting
and where they are collected. Traditional healers from villages
surrounding the mountain were interviewed during questionnaire surveys and participant observation walks. Data was gathered on general and personal information, species collected,
collection methods, patient consultation, legislation and conservation. Healers were also interviewed in their consultation
rooms. Plant specimens were collected and identified and the
conservation status of the species was investigated. This was
compared to the healers' perceptions of the rarity of the plants.
Forty one species of plants were collected from the mountain
and 37 species were noted from consulting rooms. None of
the healers interviewed had any knowledge of the most important plant conservation legislation in the province, or of the existence of a Red Data List for plants. Most interviewees (71%)
however, felt positive about the proposal of harvesting restrictions. The medicinal plants W. salutaris, H. hemerocallidea
and Boophane disticha are mentioned in the Red Data List
(2011) as endangered and declining but are not perceived as
rare or declining by the healers. Conversely, a number of least
concern plants are seen as rare by the healers. Conservation recommendations were developed.
The use of GIS in documenting medicinal plants of
Blouberg Mountain, Limpopo Province, South Africa
K.M. Mathibela, B.A. Egan, H.J. Du Plessis, M.J. Potgieter
University of Limpopo, Department of Biodiversity, Private
Bag X1106, Sovenga 0727, South Africa
A Geographic Information System (GIS) is a tool that combines statistics with geographic locations to create informative
maps. The use of GIS technology to document the indigenous
knowledge of an area has become more prevalent, however,
the analysis of medicinal plant collection pathways (tracks)
using this method is ground breaking. This study examined
the utility of a readily available and easily implemented application of Geographic Information Systems for describing and
analyzing the collection tracks of traditional healers with respect to where the most important collecting sites are located.
For the first time, healers' pathways were digitized, georeferenced and linked to other information on the medicinal
plants around Blouberg Mountain, making this information easier to analyze and access. Sixteen of the most used collection
tracks were investigated and co-ordinates taken for the
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beginning of each track, plant collection per track, change of a
track and ending of each track. Forty one medicinal plant species were documented from the 16 tracks surveyed. The collection tracks were mapped and overlaid with topographic and
demographic information as well as vegetation types of the
Blouberg Mountain. Areas of high use or areas impacting on
sensitive vegetation types are clearly evident from the map
and can be targeted for immediate remedial action. This information, particularly that regarding species of medicinal plants
utilized and most impacted areas of the mountain, will be invaluable to Limpopo conservation officials who are in the process of implementing a conservation plan for the province.
Biodiversity of Ceratocystis species infecting wounds on
elephant-damaged trees in the Kruger National Park
M. Mbenoun a , M.J. Wingfield a, B.A.D. Begoude b,
B.D. Wingfield a , J. Roux a
a
DST/NRF Centre of Excellence in Tree Health Biotechnology
(CTHB), Department of Microbiology and Plant Pathology,
Forestry and Agricultural Biotechnology Institute (FABI),
Private Bag X20, University of Pretoria, Hatfield 0028, South
Africa
b
Institute of Agricultural Research for Development (IRAD),
Nkolbisson B.P. 2067, Yaounde, Cameroon
It is now widely accepted that fungi represent a major component of the diversity of life on Earth. Their critical role in creating
and maintaining biodiversity and in the functioning of terrestrial
ecosystems is also well established. Yet, our knowledge of fungal
biodiversity remains very limited, the more so when considering
the community of micro-fungi in natural ecosystems in Africa.
The genus Ceratocystis includes important pathogens of mostly
woody plants. These micro-fungi exist in symbiotic associations
with insects, relying on morphological and semiochemical adaptations to facilitate these interactions. Ceratocystis spp. have also
received increasing attention globally because of the emergence
of serious diseases that they cause in commercial forestry plantations and native forests. Studies in South Africa have suggested
the existence of a substantial undiscovered biodiversity of Ceratocystis species in natural ecosystems in the country. In this study
we investigated the occurrence and diversity of Ceratocystis species on elephant-induced tree wounds on trees in the Kruger National Park. Surveys conducted in the park between 2009 and
2010 resulted in the collection of 298 Ceratocystis isolates,
obtained from 25 tree species in 10 plant families. Isolates were
characterized using DNA multigene phylogenies and diversity indices and estimators were calculated for the entire park as well as
for various ecozones within the park. An unexpectedly high diversity of Ceratocystis was discovered, both at genetic and species levels. We recovered 9 species in 3 Ceratocystis lineages
and at least 50 distinct haplotypes. Four of the species represent
previously unknown taxa. Although there were some differences
in species abundance and occurrence between the various ecozones, similarity indices did not show significant departure
from complete evenness. This is an indication that factors other
than the host species composition determine the distribution
and prevalence of these fungi in natural ecosystems.
Grafting method to improve vine production of orange
fleshed sweet potato cultivar ‘Resisto’ under water
stressed conditions
H.C. Mihiretu a, E. Du Toit a, J.M. Steyn a, S.M. Laurie b
a
Department of Plant Production and Soil Science, University
of Pretoria, Pretoria 0002, South Africa
b
ARC-Roodeplaat, Vegetable and Ornamental Plant Institute,
Private Bag X293, Pretoria 0001, South Africa
Orange fleshed sweet potato (Ipomoea batatus L.) (OFSP) is a
rich and cheap source of pro-vitamin A ß-carotene. Vitamin A deficiency, which leads to night blindness and infant mortality, can
be combated by dietary intervention using OFSP. Shortage of
planting material caused by a prolonged dry season is one of
the main constraints of OFSP production in Africa. Therefore,
this research was conducted to assess the vine production potential of drought sensitive OFSP cv. ‘Resisto’ (R) grafted onto
drought tolerant creamy fleshed sweet potato cvs. ‘Tanzania’
(T) and ‘Zapalo’ (Z) under different water stress conditions. Histological analysis conducted to determine the graft compatibility
of scion (R) and root stock (T and Z) revealed differentiation of
a new vascular cambium on the 10th day after grafting (DAG).
By the 23rd DAG the presence of newly restored vascular tissue
was observed. A two factor field experiment was conducted to
compare three planting materials (‘Resisto cutting’ (R), ‘Resisto × Tanzania’ (RT) and ‘Resisto × Zapalo’ (RZ)) at three deficit
irrigation levels (30%, 60% and 100% of measured deficit
refilled). RT gave significantly (α b 5%) higher above-ground
biomass yield (14.1 tha - 1) at 30% deficit irrigation. Similarly,
RT at 30% deficit irrigation showed significantly (α b 5%) higher
water use efficiency (WUE) for above-ground biomass
(179.1 kg ha - 1 mm - 1) and cutting number (7091 cuttings
ha - 1 mm - 1). Application of drought sensitivity and tolerance indices on vine yield showed that among the three planting materials used, RT was the most productive planting material at 30%
deficit irrigation level. Generally, grafting improved vine productivity of OFSP cultivars under low water conditions. This study
introduced the use of grafting techniques as a novel method to
maintain OFSP vine over prolonged drought conditions.
Comparative anatomy of the galls and equivalent healthy
plant organs in Terminalia sericea (Combretaceae)
T.E. Mphephu, L.I. Ramovha
Department of Botany, University of Venda, Private Bag
X5050, Thohoyandou 0950, South Africa
Various types of galls and the equivalent healthy plant organs of T. sericea were collected from different areas of
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Limpopo. Leaf, young stem, round axial and long axial galls
were mostly recorded in seedlings and young trees whereas
flower and seed galls were prominent on adults trees. Collected samples were fixed in 75% FAA. Sections were prepared by hand and studied under light microscope. Digital
images were taken by MR5 axio vision microscope for analysis. The main objective of the study was to establish the
cause of the galls and resultant changes induced by the
gall-forming agent to the associated plant tissues. Larvae of
various wasps and moth species were found in long axial
galls. Flower and seed galls were formed by fungi. Unidentified insects larvae were associated with Young stem, leaf and
round axial galls. Comparative anatomical examination of the
galls and healthy organs showed the proliferation in the former of new parenchyma tissue around vascular bundles and
the pith. Galls on stems are characterized by deformed and
poorly developed secondary xylem with increased medullary
rays. The results indicate that galls develop in response to the
formation of new, mainly parenchymatous tissue resulting in
local swelling of the particular plant organ. Gall-induced parenchymatous tissues are the main food source for the insect
larvae inhabiting the galls.
A survey of invasive alien plants and their current
distribution at Wonderboom Nature Reserve
B.T. Mthembu, T.P. Jaca
Early Detection and Rapid Response Programme (EDRR),
South African National Biodiversity Institute, Private Bag
X101, Pretoria 0001, South Africa
Alien plant invasion in South Africa poses a major threat
to the biodiversity and functioning of ecosystems and the services they provide. Nature reserves in the world are threatened by invasive alien plants (IAP's) and South Africa is
not an exception. The invasion of nature reserves by alien invasive plants results in ecological succession, where the new
alien invaders establish themselves and outcompete the native species. The most cost effective way to manage IAP's
is to prevent invasions before they even occur, or controlling
them at the early stages of invasion. An inventory of IAP and
their distribution inside the reserve are significant in understanding their control methods and threat to biodiversity.
The aim of this study was to identify and determine the distribution of IAP in the Wonderboom nature reserve. This information will be used by the reserve managers to develop
management plans for targeted species in the reserve. Stratified random sampling methods were used to determine the
extent of IAP's distribution inside the reserve. This study
present preliminary findings of an initial survey of IAP's inside Wonderboom Nature Reserve. A total of 17 IAP's were
identified, and their distribution was mapped using geographic information system.
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An inventory of indigenous medicinal plants used in the
treatment of sexually transmitted infections in Vhembe
District Municipality, Limpopo Province, South Africa
T.M. Mulaudzi, N.A. Masevhe
Department of Botany, School of Mathematics and Natural Sciences, University of Venda, Thohoyandou 0950, South Africa
Ethnobotanical survey was conducted to document medicinal plant species used in the treatment of sexually transmitted
infections in Vhembe District Municipality, Limpopo Province,
South Africa. Twenty one traditional healers were interviewed
using structured questionnaires. Topics discussed during the interviews were symptoms of the disease, local plant names, plant
parts used, mode of preparation, route of administration, dosage
etc. A total of 45 plant species belonging to 21 different families were reported as being used for the treatment of sexually
transmitted infections such as syphillis, gonorrhea and herpes.
The most common used families were the Myrtaceae and Apocynaceae (9.4%) and the rest contributed 2.3% only. The most
frequently used plant parts were roots (68%), stem bark
(17%) and leaves (15%). Preferred methods of preparing the
remedy were infusion and decoction, and about 91% of preparations were administered orally in variable doses until the patient was cured. Forty five medicinal plant species recorded in
this study were also used by traditional healers to treat other ailments and this may validate their efficacy. Further studies are
ongoing in order to establish their antimicrobial activity and
to isolate the active chemical components.
Hypericum pseudohenryi – An invasive alien plant in the
KZN Drakensberg and KZN Midlands
I. Nänni
Early Detection and Rapid Response Programme (EDRR –
funded by Working for Water), South African National Biodiversity Institute, P.O. Box 52099, Berea Road, Durban 4007,
South Africa
An alien species of Hypericum (Clusiaceae), recently identified as H. pseudohenryi, is invading stream beds and undisturbed grassland habitats in the KZN Drakensberg and KZN
Midlands. Preliminary investigations and risk assessment
suggest that this species poses a threat to indigenous biodiversity by out-competing indigenous species, hybridizing
with local Hypericum species and affecting stream flow dynamics in the Drakensberg catchment areas. An initial survey
of the KZN Mistbelt revealed that naturalized populations
of Hypericum pseudohenryi are more extensive and widespread than originally thought. These concerns justify the decision to fund clearing efforts in KwaZulu-Natal while
collecting information on reproductive strategy and response
to herbicides.
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SAAB Conference Abstracts
Surveillance of potential emerging wetland alien invaders
M.M. Nxumalo a, H.J.N. Sithole a, E. Van Wyk b
a
Early Detection and Rapid Response Programme (EDRR –
funded by Working for Water) South African National Biodiversity Institute, P.O. Box 52099, Berea Road, Durban 4007,
South Africa
b
Private Bag X7, Newlands 7735, Cape Town, South Africa
Hydromorphic and aquatic invasive alien plants pose a great
threat to South Africa's wetlands. They form dense stands
blocking the movement of water and aquatic fauna, cause sedimentation and outcompete indigenous plants. Their ability to
reproduce in several ways: vegetatively, sexually, through tubers and turions gives them a competitive advantage over indigenous plants. Tubers and turions have an ability to survive
adverse conditions for long period. Six potential wetland invaders are currently investigated by the Early Detection and
Rapid Response (EDRR) Programme. Four of them are listed
as category 1a on the proposed NEMBA regulation. Hydrilla
verticillata is a completely submerged aquatic plant, Hydrocleys nymphoides floats in water, Iris pseudacorus, and
Lythrium salicaria are rooted in water but emergent above the
surface. The remaining two species are newly detected invaders
and do not yet have a legal status as invaders. Sagittaria platyphylla has two forms: emergent and submerged, Spartina alterniflora have an ability to hybridize with indigenous grasses.
The varied growth forms and behavior of these plants make it
difficult to generalize about their management. The poster highlights the outcomes of the work in progress such as mapping,
assessment of ecological impacts and current levels of infestation. Reports of new sightings will add value to the work
done. Hence the purpose of the poster is to advise the public
about possible dangers, and to call for more sightings of these
species.
Indigenous medicinal plants used by traditional healers in
the stimulation of appetite of HIV/Aids related patients in
Vhembe District Municipality, Limpopo Province, South
Africa
K.R. Phalandwa, M.P. Tshisikhawe
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
The study investigated indigenous medicinal plants used by
traditional healers in the stimulation of appetite in HIV/AIDS
related patients in Vhembe District Municipality. In this study
Knowledge of traditional healers was used in order to collect
data through structured interviews. Questionnaires collected
data on causes, symptoms and the treatment of lack of appetite.
The preparation techniques and dosages of medicinal plants
were also recorded. Thirty-five plant species were recorded to
be used in the stimulation of appetite. The plants were identified and information about their other medicinal uses was also
investigated. The large amount of information on medicinal
plants used in the treatment of lack of appetite suggests the importance of traditional knowledge in appetite stimulants.
Characterization of wetland systems and zones based on
vegetation composition on the Maputaland Coastal Plain
L. Pretorius a, L. Brown a, G. Bredenkamp b, T. Mostert c
a
Applied Behavioural Ecology and Ecosystem Research Unit,
University of Pretoria, South Africa
b
Department of Plant Science, University of Pretoria, Pretoria,
South Africa
c
Department Botany, University of Zululand, KwaDlangezwa,
South Africa
The Maputaland Coastal Plain (MCP), located in northeastern KwaZulu-Natal, is dominated by cover sands and is therefore regarded a sandy coastal aquifer. According to the Department of Water Affairs' wetland delineation and manual
delineating wetlands on these aquifers is complex due to problematic wetland soils. It is believed that an understanding of the
vegetation composition of wetlands on the MCP can aid wetland
delineators. The aim of this study was to classify and describe the
vegetation of the different zones of the various wetland systems
to determine if differences in vegetation could assist in delineation and understanding of these complex ecosystems. Thirteen
wetlands that can be grouped into four wetland systems located
between Tembe Elephant Park in the west and Kosi-Bay in the
east were surveyed. In each wetland the permanently wet, the seasonally wet, and the terrestrial zones were sampled. - 1A total of
73 relevés of 4 m 2 size were placed using the modified Braun–
Blanquet cover abundance scale. The relevés were captured into
Turboveg for Windows 1.97 and imported into JUICE 7.0. A
modified TWINSPAN was performed to determine a first approximation of the vegetation. A phytosociological table was
compiled. Synoptic tables and dendrograms were used to aid in
the identification of vegetation clusters. Preliminary results identify 11 vegetation communities which are strongly related to the
wetland types as defined by the hydrological regime, geohydromorphological setting, and substrate type. Variation of the vegetation composition within the specific wetlands gives a strong
indication of zoning, which is related to the wetness gradient
within each system. These results contribute to the understanding
of the relationship between vegetation and environmental drivers
within wetland systems, and can be used to aid wetland delineation on the MCP.
Biological activity of methyl ursolate from Funtumia africana
(Apocynaceae) leaf extracts
T.E. Ramadwa a, E.E. Elgorashi b, J.N. Eloff a
a
Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Sciences, University of Pretoria,
Private Bag X04, Onderstepoort 0110, South Africa
SAAB Conference Abstracts
b
Currently ARC-Onderstepoort Veterinary Institute, Private
Bag X05, Onderstepoort 0110, South Africa
F. africana is traditionally used across Africa to treat diverse
ailments including infectious diseases, burns and others. The
aim of the study was to evaluate the antibacterial, antifungal,
and anti-inflammatory activities of the acetone extract of
F. africana leaves, together with its fractions (Hexane, chloroform, 30% in methanol, butanol, and water) and the isolated
bioactive compound. The antimicrobial activity was evaluated
using serial microdilution assay and bioautography. The antiinflammatory activity was determined using both cyclooxygenase (COX-1) and cylooxygenase (COX-2) enzymes. The four
nosocomial bacterial pathogens tested were E. coli, E. faecalis,
P. aeruginosa and S. aureus. The fungal test organisms used
were A. fumigatus, C. neoformans, C. albicans, F. oxysporum,
Penicillium janthinellum and Rhizoctonia solani. The crude
extract of F. africana had minimal inhibitory concentration
(MIC) as low as 0.08 mg/ml against both bacterial and fungal
test organisms. On bioautography, F. africana crude extract
had consistent antibacterial activity against all the bacteria
with clear zones of inhibition on TLC bioautograms. The
chloroform fraction had an MIC as low as 20 μg/ml against
P. aeruginosa. The crude extract together with hexane and
chloroform fractions had moderate activity against both COX1 and COX-2. The chloroform fraction was more active than
the crude extract (59.7 ± 1.4%) with an inhibition of 68.2 ±
6.6% against COX-1. One antimicrobial compound was isolated from chloroform fraction using column chromatography and
chemically characterized as methyl ursolate using NMR and
Mass Spetroscopy. MU had an MIC as low as 63 μg/ml against
F. oxysporum. Although MU was less active against all the bacteria with MIC values N250 μg/ml, the MIC value of chloroform fraction (20 μg/ml) was more than hundred times lower
than the MIC of MU. This provides strong evidence of synergistic activities and may be a model to investigate how synergism contributes to antimicrobial activities.
An inventory of indigenous medicinal plants used in the
treatment of thrush and related infections in Vhembe
District Municipality, Limpopo Province, South Africa
S. Ramulifho, N.A. Masevhe
Department of Botany, School of Mathematics and Natural Sciences, University of Venda, Thohoyandou 0950, South Africa
Ethnobotanical survey was conducted to document indigenous medicinal plants used in the treatment of thrush in
Vhembe District Municipality, Limpopo Province, South Africa. Twenty one traditional healers were interviewed using
structured questionnaires. Some of the topics discussed with
the traditional healers included symptoms of the disease, local
plant names, plant parts used, mode of preparation, route of administration and dosage. A total of 55 plant species belonging
to 23 different families were recorded. The most common
237
used families were Celestraceae and Rutaceae (11.4%) and
the rest of the families contributed (2.1%) each. Plant parts frequently used were roots (62%), then followed by stem bark
(27%), leaves (9%) and seeds (2%). The most common preparations were infusion and decoction. Oral application had the
highest mode of administration (83.7%) while the combination
of both oral and external applications was (12.5%). A total of
55 plant species used to treat thrush by traditional healers support the importance which the medicinal plants have in the primary health care of the rural people. These plant species were
also found to be used in other parts of the world for treating a
variety of diseases and further investigation is going on to determine their antimicrobial activity.
SNP-based genetic linkage maps of cassava (Manihot
esculenta)
S.M. Reynolds a, M.M. Van Dyk a, M. Luo b, E. Okogbenin c,
L.A. Becerra Lopez-Lavalle d, M. Ferguson e, A.A. Myburg a,
P. Rabinowicz f
a
Department of Genetics – Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
b
University of California, Davis CA, USA
c
National Root Crops Research Institute, Nigeria
d
International Center for Tropical Agriculture (CIAT),
Colombia
e
International Institute for Tropical Agriculture (IITA), Nairobi, Kenya
f
Institute for Genome Sciences, University of Maryland School
of Medicine, Baltimore, MD, USA
Cassava is a highly heterozygous staple crop grown in the
tropical regions of Africa, Asia and Latin America. To date,
six genetic linkage maps have been published for cassava,
using mainly AFLP, RFLP and SSR markers. However, to
our knowledge no genetic maps incorporating SNP markers
have been reported. Our aim was to construct genetic linkage
maps for a cassava mapping pedigree using SNP markers developed from expressed gene sequences and BAC-end sequences. Three custom designed GoldenGate Genotyping
(Illumina) kits were used to genotype the CTS-1A drought tolerance mapping population (235 progeny) resulting from a
cross between MCOL1734 (female, drought tolerant) and
VEN77 (male, drought susceptible). This population was
grown in a CIAT field in Columbia as part of a collaborative
project funded by the Generation Challenge Program (GCP).
Both parents and 226 progeny were successfully genotyped
with 718 SNP markers, of which 556 (68%) were polymorphic
in the parents. GenTrain scores ranged from 0.39-0.97, with an
average of 0.82. JoinMap (Kyazma) was used to construct linkage maps consisting of 430 SNP markers distributed in 19 linkage groups (LOD 4.0), each one containing between 3 and 63
markers and spanning 2.9-162.7 cM (Kosambi) in length. The
total map length was 1219 cM with an average marker interval
238
SAAB Conference Abstracts
of 2.94 cM. The coverage and resolution of these maps will be
increased by the addition of 124 SSR markers. In addition,
using the same SNP markers, genome-wide SNP diversity patterns will be assessed using 217 cassava germplasm accessions
from Africa and Latin America. These maps will also be useful
for future QTL studies of drought tolerance, a trait that is
expected to segregate in this population.
Expression analysis of two genes during three different
wheat-Puccinia interactions using qPCR
J.J. Scholtz, B. Visser
Department Plant Sciences, University of the Free State, P.O.
Box 339, Bloemfontein 9300, South Africa
Two unidentified genes that could play a role during the defense response of wheat (T. aestivum) following infection by
Puccinia triticina were recently cloned. Real-time PCR
(qPCR) was used to evaluate the expression levels of both
genes during infection of wheat by P. triticina, P. graminis
f.sp. tritici and Puccinia striiformis respectively. Normalization
of qPCR data requires stable reference genes under all environmental and physiological circumstances. Since limited information on reference genes during wheat–rust interactions was
available, the stability of six candidate reference genes during
the three respective interactions was determined. The geometric
means of multiple reference genes most suitable for normalization for each interaction were identified using the geNorm Plus
algorithm. For P. triticina infected wheat, the 18s rRNA and
RLI genes showed the best stability and for P. striiformis
infected wheat, CDC and RLI were the most stable combination. P. graminis f.sp. tritici infected wheat required three reference genes, namely CDC, 18S rRNA and GAPDH. Using the
appropriate reference genes, the differential expression of the
cloned genes was confirmed.
Catharanthus roseus: Extraordinary Bapedi medicinal herb
for gonorrhea
S.S. Semenya a, L.J.C. Erasmus b, M.J. Potgieter a
a
Departments of Biodiversity and bPhysiology and Environmental Health, School of Molecular and Life Sciences, University of Limpopo, Private Bag X1106, Sovenga 0727, South
Africa
C. roseus is a widespread exotic perennial herb, with numerous variations in flower color. It is world renowned for its contribution to the development of specific anti-cancer drugs, as well as
its hypoglycaemic activity. Existing South African findings indicated poor anti-STI activity from leaf extracts. However, Bapedi
traditional healers exclusively utilize root extracts to treat gonorrhea. Support for this use is found in the vernacular name for
C. roseus; lepolomo le pinki la drop, which alludes to the presence of an abnormal urethral discharge in the symptomatic
presentation of gonorrhea. Current uses and research, focuses
predominantly on aerial parts of this species. The unique Bapedi
custom to exclusively use roots warrants further investigation to
validate its efficacy in the treatment of gonorrhea
Expression and characterisation of EgrSND2, a Eucalyptus
grandis transcription factor potentially involved in
secondary cell wall regulation
P. Singh a,b , S.G. Hussey a,b, C. Maritz-Olivier a, E. Mizrachi a,b,
A.A. Myburg a,b
a
Department of Genetics, bForestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria
0002, South Africa
The transcriptional regulation of secondary cell wall (SCW)
biosynthesis has been studied extensively in A. thaliana, revealing a hierarchy of predominantly NAC and MYB transcription factors that regulate the formation of cellulose, hemicellulose and lignin, the three main SCW biopolymers.
AtMYB103, AtSND2 and AtSND3 transcription factors have
been found to regulate SCW-associated cellulose synthase
(CesA) genes in A. thaliana. Cellulose fibers from E. grandis
wood are one of the most commonly used short fiber sources
for pulpwood in the paper industry. Our understanding of the
regulation of cellulose biosynthesis is vital to the pulping industry and will have great economic impact. Currently, the transcriptional network regulating SCW biosynthesis in E.
grandis is poorly understood. We aimed to identify and clone
an E. grandis ortholog of AtSND2, heterologously express the
protein and evaluate its promoter binding specificity. The
EgrSND2 coding sequence was cloned into the pET160 vector
and transformed into the E. coli BL21Star strain, which was
used to optimize expression using temperature, time and inducer concentration parameters. We obtained exclusively insoluble
protein when expression was induced at temperatures of 25 °C,
30 °C and 37 °C and IPTG concentrations of 0.1 mM, 0.5 mM
and 1 mM over 24 h. Hence, we adopted a protein unfolding/
refolding approach by purifying inclusion bodies and denaturing and refolding the heterologous protein. Soluble protein
and candidate E. grandis gene promoter fragments will be analyzed by electrophoretic mobility shift assays to identify direct
targets of EgrSND2.
A study of a population of a Thamnochortus species at the
Sundays River, Eastern Cape
S. Situngu, R.A. Lubke
Department of Botany, Rhodes University, Grahamstown 6140,
South Africa
A population of a Thamnochortus species has been discovered in the Sundays River mouth region. There were many species planted in the area by the Department of Forestry to
SAAB Conference Abstracts
stabilize the mobile dune field but Thamnochortus species were
never used in the stabilization programme. The population of
plants seemed to be indigenous to the area and is confined to
the limestone cliffs along the old and present river valley
away from the stabilization site. Thamnochortus species of
the Western Cape growing on alkali sands and limestone were
studied and compared with the population at the Sundays
River region. A multivariate analysis was performed on both
quantitative and qualitative characters to test whether the Sundays River species was different from the Western Cape species. The Sundays River Thamnochortus species showed
affinity with Thamnochortus erectus, Thamnochortus muirii
and Thamnochortus spicigerus in some characters and affinity
with T. insignis on other characters. The Sundays River species
formed a single group in the cluster analysis and in the PCA
analysis suggesting that species is different from the other
Thamnochortus species. Thus the Sundays River species appears to be morphologically different from the Western Cape
species and should perhaps be considered a new species. However, more studies on genetic variation between these species
are required to substantiate these findings.
Analysis of genetic variation in Moringa oleifera (lam.)
using RAPDs and SSRs
R. Smit, E.S. Du Toit, B.J. Vorster
Department of Plant Production and Soil Science, University of
Pretoria, Pretoria 0002, South Africa
M. oleifera is potentially an economically important tree
species. It has gained interest globally for its multipurpose
uses, in particular as a source of nutrition and oil as well as various medicinal properties. Moringa is native to India, Malaysia
and the Middle East, but has been introduced to many countries
throughout Africa ranging from Niger to South Africa. There is
however limited knowledge regarding the genetic variation of
both native and introduced populations of Moringa, although
phenotypic observations suggest the presence of significant genetic diversity. In this study we aim to determine the level of
genetic variation found between different populations of Moringa from locations including India, South Africa, Malawi
and Hawaii. Molecular markers such as Random Amplified
Polymorphic DNA (RAPD) and Simple Sequence Repeats
(SSR, will be used to analyze the genetic diversity based on
their success in other tropical tree population studies). Their
low capability for SSR conservation, make them ideal for the
application at the intra-specific level. Various RAPD primers
and 20 SSR primer pairs will be used to generate amplification
profiles that can be used in a diversity analysis. Early screening
has identified markers that show significant genetic diversity
amongst the population. Furthermore the study will try to identify markers related to quantitative traits such as seed oil content and yield that could potentially be useful in future
selection and breeding programs aimed at tree improvement.
239
How generalized is the pollination system of Hypoestes
aristata?
C-J. Thorne, C. Gornall, C.I. Peter
Department of Botany, Rhodes University, Grahamstown 6140,
South Africa
Generalized pollination systems are underrepresented in the
literature. Observations have shown numerous insects and birds
visiting H. aristata (Vahl) Sol. Ex Roem. & Schult var. aristata. We therefore set out to test hypothesis that this species
is an extreme generalist by 1) recording the suite of insects
and birds visiting the flowers 2) determining pollen loads of
the most frequently collected insect visitors and 3) the visitation
rates of different pollinators. We recorded a total of 45 species
of insects visiting the flowers. These represented 19 families
and 4 orders. In addition, four species of sunbirds have been
observed visiting the flowers opportunistically. The orders Diptera and Hymenoptera were shown to have the greatest pollen
loads, in particular species from the families Acroceridae,
Nemistrinidae and Apidae. Although late in the season honeybees were by far the most abundant visitors and showed the
highest visitation rate. In conclusion, a wide variety of pollinators visit H. aristata and contribute to this generalized pollination system but late in the season honeybees predominate.
The treatment of persistent headache in HIV/aids related
patients by the traditional healers of Vhembe District
Municipality, Limpopo Province, South Africa
T. Tshilande, M.P. Tshisikhawe
Department of Botany, University of Venda, Thohoyandou
0950, South Africa
The recent study was about indigenous medicinal plants used
by traditional healers in the treatment of persistent headache in
HIV/AIDS related patients of Vhembe District Municipality,
Limpopo Province, South Africa. In this study knowledge of traditional healers was used in order to collect data. Data was collected through the use of interviews. Questions such as the
cause, symptoms and treatment of persistent headache were
asked, and also the preparation and dosages were asked through
interviews. In this study, traditional healers reported that 45
plant species were used in the treatment of persistent headache
and of those plants; 31 were identified given their family, scientific name and given information about their other medicinal
uses. It was concluded that indeed knowledge of traditional
healers is of importance in the treatment of persistent headache
as well as for the patients infected by HIV/AIDS.
Landscape functionality and plant diversity in urban and
rural grassland fragments in the Tlokwe Municipal area
L. Van der Walt, S.S. Cilliers, K. Kellner, M.J. Du Toit
240
SAAB Conference Abstracts
School of Environmental Sciences and Development, NorthWest University, Potchefstroom, South Africa
The effect of four medicinal plants on oral Candida albicans
isolates
Grassland habitats around the world have been identified as
a biodiversity conservation priority. South Africa's grassland
biome, covering 16.5% of the country's surface, is one of the
biologically richest in the country. Unfortunately nearly 30%
of it has been transformed by activities such as urbanization,
cultivation, mining, and forestry. The remaining untransformed
grassland areas are fragmented to a critical extent, such as the
Rand Highveld grassland vegetation type. A mere 1% of this
endangered vegetation type is currently being conserved. The
fragmentation, transformation and exotic species invasion of
landscapes worldwide are threatening biodiversity and altering
ecological processes, spatial organization of physical landscape
attributes, as well as species distribution and composition.
Fragmentation of the Rand Highveld Grassland may also influence the functionality of such landscapes. To understand how a
landscape functions, and why a landscape may be deemed functional or healthy, knowledge about the processes taking place in
landscapes (to enable it to function effectively as a biogeochemical or biophysical system) must be obtained. This can
be done using the Landscape Function Analysis (LFA) method.
Patches play a vital role in landscapes by capturing and utilizing natural resources such as water, nutrients, and soil sediments and are thus indicators of the extent to which
landscapes are functional or dysfunctional. Generally habitat
remnants in urban areas are considered to be extensively disturbed and no longer functional or species rich, leading to a perception that these fragments need not be as actively conserved
as fragments in rural or more “natural” landscapes. In this proposed study we aim to quantify an urban–rural gradient, and
describe differences and similarities between urban and rural
grassland fragments in terms of species composition, species
richness, functional diversity and landscape functionality, in
the Tlokwe Municipal area, situated in the Rand Highveld
Grassland vegetation type. This comparison will allow for recommendations to be made in terms of conservation priorities of
grassland remnants.
C. Van Wyk a, F.S. Botha a, V. Steenkamp b, J.N. Eloff a
a
Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Sciences, University of Pretoria,
South Africa
b
Department of Pharmacology, School of Medicine, Faculty of
Health Sciences, University of Pretoria, South Africa
Crude acetone, water and hexane extracts of four plant species, used as traditional medicine to treat fungal related diseases
or shown to contain antifungal activity, were evaluated so as to
identify new sources of chemical entities which can be used in
the treatment of fungal infections. Antifungal activity against
C. albicans standard strain (ATCC 10231) and six clinical isolates was determined using the serial microplate dilution method. Antioxidant activity was determined using the TEAC and
DPPH assays and cytotoxicity against mouse fibroblast cells.
MIC's below b1 mg/ml were observed for the acetone and
water extracts of S. birrea (stem–bark), as well as the acetone
extracts of Harpephyllum caffrum (leaves), P. obliquum
(leaves) and R. melanophloeos (leaves). Bioautography confirmed the presence of compounds with antifungal activity in
S. birrea and P. obliqum. S. birrea contained the highest antioxidant activity with the lowest cytotoxicity. These results implicate that the extracts contain compounds with therapeutic
potential against oral C. albicans isolates.